RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CDYL2Q8N8U2 506 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 OR11G2Q8NGC1 345 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 C9orf43Q8TAL5 461 aaPredicted RBP9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 M1APQ8TC57 530 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 AGAP11Q8TF27 550 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 TTC9Q92623 222 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 MOCOSQ96EN8 888 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 PEX11GQ96HA9 241 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 PTCHD1Q96NR3 888 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 AGAP4Q96P64 663 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 LMF1Q96S06 567 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 SLC25A23Q9BV35 468 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 VN1R1Q9GZP7 353 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 LHPPQ9H008 270 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 ILKAPQ9H0C8 392 aaPredicted RBP9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 ZNF700Q9H0M5 742 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 SLC25A18Q9H1K4 315 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 SPNS1Q9H2V7 528 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 GSTO2Q9H4Y5 243 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 EPS8L2Q9H6S3 715 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 PRDM7Q9NQW5 492 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 PRTFDC1Q9NRG1 225 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 HCN3Q9P1Z3 774 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 SLC12A4Q9UP95 1085 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 ASB1Q9Y576 335 aa9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 MRPS18BQ9Y676 258 aaKnown RBP9.68□□□□□ -0.86
TRAFD1-208ENST00000552890 SLCO1B7G3V0H7 640 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 AZIN1O14977 448 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 PRAMEF4O60810 478 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 VPS4BO75351 444 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 SPAG7O75391 227 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 OR4F21O95013 312 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 FAM58BPP0C7Q3 252 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 DRD2P14416 443 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 H2AFXP16104 143 aaPredicted RBP9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 GALNSP34059 522 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 GMPRP36959 345 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 RPL3P39023 403 aaKnown RBP9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 MAPK12P53778 367 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 LIM2P55344 173 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 OR4D2P58180 307 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 RPS18P62269 152 aaKnown RBP9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 PLIN5Q00G26 463 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 MAD2L1Q13257 205 aaPredicted RBP9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 SLAMF1Q13291 335 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 IL10RAQ13651 578 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 ATP1A4Q13733 1029 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 PCLAFQ15004 111 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 LACTB2Q53H82 288 aaPredicted RBP9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 CRB2Q5IJ48 1285 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 CCNYL2Q5T2Q4 361 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 PRAMEF9Q5VWM5 478 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 PLAG1Q6DJT9 500 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 LETMD1Q6P1Q0 360 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 KIRREL2Q6UWL6 708 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 TRIM46Q7Z4K8 759 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 PPP1R32Q7Z5V6 425 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 PDSS2Q86YH6 399 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 LRRC34Q8IZ02 419 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 LGI4Q8N135 537 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 CA13Q8N1Q1 262 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 METTL4Q8N3J2 472 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 SLC5A8Q8N695 610 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 HORMAD2Q8N7B1 307 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 EXTL1Q92935 676 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 RBM18Q96H35 190 aaKnown RBP9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 NSUN5Q96P11 429 aaKnown RBP9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 OR51B5Q9H339 312 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 KLHL31Q9H511 634 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 RPF2Q9H7B2 306 aaKnown RBP9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 TMBIM4Q9HC24 238 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 ADAP2Q9NPF8 381 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 GIMAP4Q9NUV9 329 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 SIRT5Q9NXA8 310 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 MCM8Q9UJA3 840 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 FBXL4Q9UKA2 621 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 HS3ST3B1Q9Y662 390 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 CLCA3PQ9Y6N3 262 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 CACNA1GO43497 2377 aa9.67□□□□□ -0.86
TRAFD1-208ENST00000552890 C1orf226A1L170 272 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 DYTNA2CJ06 578 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 LRRC14BA6NHZ5 514 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 ARGFXA6NJG6 315 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 NPIPB8E9PQR5 432 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 PLPP1O14494 284 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 SOCS6O14544 535 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 FFAR3O14843 346 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 GPR42O15529 346 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 ZZEF1O43149 2961 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 ATP8B1O43520 1251 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 B4GALT2O60909 372 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 CEACAM4O75871 244 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 RSL1D1O76021 490 aaKnown RBP9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 HSPA4LO95757 839 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 PDYNP01213 254 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 NR2F6P10588 404 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 ITGA3P26006 1051 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 ETV4P43268 484 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 MAGOHP61326 146 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms