RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SMAD5Q99717 465 aaKnown RBP17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 LYRM4Q9HD34 91 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 PRTFDC1Q9NRG1 225 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 MKS1Q9NXB0 559 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 C5AR2Q9P296 337 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 ANAPC2Q9UJX6 822 aa17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 TNRC6AQ8NDV7 1962 aaKnown RBP17.38■□□□□ 0.37
PRPF40B-216ENST00000552301 CCDC151A5D8V7 595 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 G3V2L1 256 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 RGS16O15492 202 aaPredicted RBP17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 OR4F21O95013 312 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 SEMA3DO95025 777 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 SCELO95171 688 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 KRT6AP02538 564 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 KRT6BP04259 564 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 SERPINA7P05543 415 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 HMOX2P30519 316 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 KRT6CP48668 564 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 ARFIP1P53367 373 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 ZNF844Q08AG5 666 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 SLC13A2Q13183 592 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 CUL3Q13618 768 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 BTBD16Q32M84 506 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 PAPD4Q6PIY7 484 aaKnown RBP17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 ZNF793Q6ZN11 406 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 RIPOR1Q6ZS17 1223 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 UBE3DQ7Z6J8 389 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 CROCCP2Q86T23 111 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 ZNF605Q86T29 641 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 ZNF595Q8IYB9 648 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 EFCAB3Q8N7B9 438 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 CDYL2Q8N8U2 506 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 SLC29A3Q9BZD2 475 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 ZNF552Q9H707 407 aaPredicted RBP17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 PSD3Q9NYI0 1048 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 AHSPQ9NZD4 102 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 SENP1Q9P0U3 644 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 PPT2Q9UMR5 302 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 DOCK10Q96BY6 2186 aa17.37■□□□□ 0.37
PRPF40B-216ENST00000552301 FASNP49327 2511 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 PPP6CO00743 305 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 PLPP1O14494 284 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 SLC28A2O43868 658 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 PRR35P0CG20 571 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 MAOAP21397 527 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 CPN2P22792 545 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 PKNOX1P55347 436 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 HSD17B7P56937 341 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 BTG2P78543 158 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 Q0VFX4 171 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 ASPHQ12797 758 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 EXT1Q16394 746 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 CEP85LQ5SZL2 805 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 CYP20A1Q6UW02 462 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 NUDT13Q86X67 352 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 BANPQ8N9N5 519 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 CSF3RQ99062 836 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 SORBS1Q9BX66 1292 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 C12orf65Q9H3J6 166 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 CENPHQ9H3R5 247 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 EPS8L2Q9H6S3 715 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 NMRK1Q9NWW6 199 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 PHF11Q9UIL8 331 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 FBXW2Q9UKT8 454 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 PLLPQ9Y342 182 aa17.36■□□□□ 0.37
PRPF40B-216ENST00000552301 BLACEA4D250 179 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 SYNDIG1LA6NDD5 238 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 SPAG7O75391 227 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 CRCPO75575 148 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 ENO1P06733 434 aaKnown RBP17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 TLX1P31314 330 aaPredicted RBP17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 NAGLUP54802 743 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 DNAJB13P59910 316 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 SLAMF1Q13291 335 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 LIPMQ5VYY2 423 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 PLAG1Q6DJT9 500 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 JMJD6Q6NYC1 403 aaPredicted RBP17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 ATG14Q6ZNE5 492 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 ZCCHC7Q8N3Z6 543 aaKnown RBP17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 ZADH2Q8N4Q0 377 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 METTL6Q8TCB7 284 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 BRIX1Q8TDN6 353 aaKnown RBP17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 SREK1Q8WXA9 508 aaKnown RBP17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 IMMP1LQ96LU5 166 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 FAM111AQ96PZ2 611 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 MAPKAP1Q9BPZ7 522 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 GSTO2Q9H4Y5 243 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 MID1IP1Q9NPA3 183 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 OXSMQ9NWU1 459 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 LYARQ9NX58 379 aaKnown RBP17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 MS4A12Q9NXJ0 267 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 SLC12A4Q9UP95 1085 aa17.35■□□□□ 0.37
PRPF40B-216ENST00000552301 IGKV3D-11A0A0A0MRZ8 115 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 A0A1B0GTL3 188 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 TCRBV16S1A1N1A0A5B0 115 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 ARHGAP10A1A4S6 786 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 H3BQF6 201 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 ETHE1O95571 254 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 CELA2AP08217 269 aa17.34■□□□□ 0.37
PRPF40B-216ENST00000552301 MYZAPP0CAP1 466 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms