RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 XKR6Q5GH73 641 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 RBM20Q5T481 1227 aaKnown RBP13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 C1orf185Q5T7R7 199 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 C16orf47Q6ZP98 133 aaPredicted RBP13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 FAM47EQ6ZV65 393 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 TRILQ7L0X0 811 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 WDR53Q7Z5U6 358 aaPredicted RBP13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 THOC6Q86W42 341 aaKnown RBP13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 ZNF595Q8IYB9 648 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 TMEM251Q8N6I4 163 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 TTLQ8NG68 377 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 GOT1L1Q8NHS2 421 aaPredicted RBP13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 DAZLQ92904 295 aaKnown RBP13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 SARAFQ96BY9 339 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 LRRC46Q96FV0 321 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 SIGLEC10Q96LC7 697 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 ALPK1Q96QP1 1244 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 LDAHQ9H6V9 325 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 ZNF358Q9NW07 568 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 B4GALT7Q9UBV7 327 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 LIPGQ9Y5X9 500 aa13.16□□□□□ -0.3
CHMP1A-210ENST00000551981 EML6Q6ZMW3 1958 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 CTAGE15A4D2H0 777 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 TMEM200CA6NKL6 621 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 G3V3Y1 287 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 WWP2O00308 870 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 B3GALT2O43825 422 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 SUSD5O60279 629 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 IFNA16P05015 189 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 CCDC175P0C221 793 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 HPDP32754 393 aaPredicted RBP13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 DGKQP52824 942 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 CCZ1BP86790 482 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 FOXD4Q12950 439 aaPredicted RBP13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 RCN2Q14257 317 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 WLSQ5T9L3 541 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 RTL6Q6ICC9 239 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 CTAGE6Q86UF2 777 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 AGGF1Q8N302 714 aaeCLIP13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 FAM47BQ8NA70 645 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 GOLM1Q8NBJ4 401 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 MORN4Q8NDC4 146 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 OR14A16Q8NHC5 309 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 SGCZQ96LD1 299 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 GPATCH1Q9BRR8 931 aaKnown RBP13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 EXO5Q9H790 373 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 LIN28AQ9H9Z2 209 aaKnown RBP13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 RASSF1Q9NS23 344 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 SACM1LQ9NTJ5 587 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 SLC22A14Q9Y267 594 aa13.15□□□□□ -0.3
CHMP1A-210ENST00000551981 ATP6AP2A0A1C7CYW4 349 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 GOLGA6L6A8MZA4 724 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 TGFBR3LH3BV60 316 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 ERI3O43414 337 aaKnown RBP13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 PROM1O43490 865 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 NRDCO43847 1150 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 HCN1O60741 890 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 H2AFYO75367 372 aaKnown RBP13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 ATP6AP2O75787 350 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 TTC4O95801 387 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 AHSGP02765 367 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 P04436 131 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 GABRA1P14867 456 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 GSTM2P28161 218 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 GABRB3P28472 473 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 UQCRC1P31930 480 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 CXCR5P32302 372 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 ADH7P40394 386 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 HK2P52789 917 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 STX4Q12846 297 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 RUNX2Q13950 521 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 SLC10A1Q14973 349 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 HYAL4Q2M3T9 481 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 ZNF750Q32MQ0 723 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 RIPPLY2Q5TAB7 128 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 TTC27Q6P3X3 843 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 OPN5Q6U736 354 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 CAMKMTQ7Z624 323 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 CLNKQ7Z7G1 428 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 LIX1LQ8IVB5 337 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 CNTN4Q8IWV2 1026 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 NAT8LQ8N9F0 302 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 OR5L2Q8NGL0 311 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 OR8K3Q8NH51 312 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 CCT6BQ92526 530 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 MAGOHBQ96A72 148 aaKnown RBP13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 SCYL1Q96KG9 808 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 PWWP2AQ96N64 755 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 AICDAQ9GZX7 198 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 LIME1Q9H400 295 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 LZTFL1Q9NQ48 299 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 ALKBH4Q9NXW9 302 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 CORO1CQ9ULV4 474 aaPredicted RBP13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 PLEKHA6Q9Y2H5 1048 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 ARHGAP21Q5T5U3 1957 aa13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 NSD1Q96L73 2696 aaPredicted RBP13.14□□□□□ -0.31
CHMP1A-210ENST00000551981 A0A0G2JN53 185 aa13.13□□□□□ -0.31
CHMP1A-210ENST00000551981 GNAZP19086 355 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms