RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 A0A1W2PR48 441 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 A0A1W2PS29 197 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 PDLIM1O00151 329 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 PGRMC2O15173 223 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 ZNF888P0CJ79 500 aaPredicted RBP18.7■□□□□ 0.58
SSH1-209ENST00000551165 UMPSP11172 480 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 ETFAP13804 333 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 SLC5A12Q1EHB4 618 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 VMACQ2NL98 169 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 ASPGQ86U10 573 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 IQCHQ86VS3 1027 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 ARL14Q8N4G2 192 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 TNIP2Q8NFZ5 429 aa18.7■□□□□ 0.58
SSH1-209ENST00000551165 DCAF13Q9NV06 445 aaKnown RBP18.7■□□□□ 0.58
SSH1-209ENST00000551165 ZNF282Q9UDV7 671 aaPredicted RBP18.7■□□□□ 0.58
SSH1-209ENST00000551165 C9P02748 559 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 BMP2P12643 396 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 FASP25445 335 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 BTN3A2P78410 334 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 ELOCQ15369 112 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 ZNF750Q32MQ0 723 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 CMPK2Q5EBM0 449 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 CPZQ66K79 652 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 MRM1Q6IN84 353 aaKnown RBP18.69■□□□□ 0.58
SSH1-209ENST00000551165 TRIM40Q6P9F5 258 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 ZCCHC10Q8TBK6 192 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 TMEM74BQ9NUR3 256 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 SNX8Q9Y5X2 465 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 OR5K3A6NET4 321 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 SOCS2O14508 198 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 CTSBP07858 339 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 SOAT1P35610 550 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 PCBP4P57723 403 aaKnown RBP18.69■□□□□ 0.58
SSH1-209ENST00000551165 SRSF5Q13243 272 aaKnown RBP18.69■□□□□ 0.58
SSH1-209ENST00000551165 SLC9A5Q14940 896 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 CWF19L1Q69YN2 538 aaKnown RBP18.69■□□□□ 0.58
SSH1-209ENST00000551165 TM4SF19Q96DZ7 209 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 LRCH1Q9Y2L9 728 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 MRPS2Q9Y399 296 aaKnown RBP18.69■□□□□ 0.58
SSH1-209ENST00000551165 MAP4K5Q9Y4K4 846 aa18.69■□□□□ 0.58
SSH1-209ENST00000551165 C7orf72A4D263 438 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 NOBOXO60393 691 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 GSTM2P28161 218 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 CRATP43155 626 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 HSPB3Q12988 150 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 ANKFN1Q8N957 763 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 BAHD1Q8TBE0 780 aaPredicted RBP18.68■□□□□ 0.58
SSH1-209ENST00000551165 NECAB3Q96P71 396 aaPredicted RBP18.68■□□□□ 0.58
SSH1-209ENST00000551165 THEGQ9P2T0 379 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 DOLKQ9UPQ8 538 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 PCDHGA2Q9Y5H1 932 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 PDPK1O15530 556 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 B4GALT2O60909 372 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 EIF2S1P05198 315 aaKnown RBP18.68■□□□□ 0.58
SSH1-209ENST00000551165 FNTBP49356 437 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 CCT8P50990 548 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 LRRC23Q53EV4 343 aaPredicted RBP18.68■□□□□ 0.58
SSH1-209ENST00000551165 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.68■□□□□ 0.58
SSH1-209ENST00000551165 RNF130Q86XS8 419 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 UTP15Q8TED0 518 aaKnown RBP18.68■□□□□ 0.58
SSH1-209ENST00000551165 DNASE2BQ8WZ79 361 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 MAPKAP1Q9BPZ7 522 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 FAM60AQ9NP50 221 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 ENTPD2Q9Y5L3 495 aa18.68■□□□□ 0.58
SSH1-209ENST00000551165 THADAQ6YHU6 1953 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 H0YGG7 62 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 RETP07949 1114 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 ST6GAL1P15907 406 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 AQP1P29972 269 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 CDK9P50750 372 aaKnown RBP18.67■□□□□ 0.58
SSH1-209ENST00000551165 CRYBA2P53672 197 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 MANFP55145 182 aaKnown RBP18.67■□□□□ 0.58
SSH1-209ENST00000551165 ARF3P61204 181 aaPredicted RBP18.67■□□□□ 0.58
SSH1-209ENST00000551165 STXBP1P61764 594 aaKnown RBP18.67■□□□□ 0.58
SSH1-209ENST00000551165 DUSP2Q05923 314 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 SLC36A4Q6YBV0 504 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 NTN4Q9HB63 628 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 IL21RQ9HBE5 538 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 STARD5Q9NSY2 213 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 OAZ3Q9UMX2 235 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 WBP11Q9Y2W2 641 aaKnown RBP18.67■□□□□ 0.58
SSH1-209ENST00000551165 GMEB1Q9Y692 573 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 WDFY4Q6ZS81 3184 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 FAM221BA6H8Z2 402 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 AQP9O43315 295 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 TBX19O60806 448 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 AIFM1O95831 613 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 ALPPL2P10696 532 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 IL1RNP18510 177 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 RPS26P62854 115 aaKnown RBP18.67■□□□□ 0.58
SSH1-209ENST00000551165 FOLH1Q04609 750 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 LRRC74AQ0VAA2 488 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 FAM98BQ52LJ0 330 aaKnown RBP18.67■□□□□ 0.58
SSH1-209ENST00000551165 PRSS41Q7RTY9 318 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 OOSP2Q86WS3 158 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 GKN2Q86XP6 184 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 NT5CQ8TCD5 201 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 SLC47A1Q96FL8 570 aa18.67■□□□□ 0.58
SSH1-209ENST00000551165 CENPNQ96H22 339 aaPredicted RBP18.67■□□□□ 0.58
SSH1-209ENST00000551165 SIRT3Q9NTG7 399 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms