RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 SLC25A46Q96AG3 418 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 RTP3Q9BQQ7 232 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 CDCA4Q9BXL8 241 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 LINC00597Q9H2U6 94 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 NKIRAS2Q9NYR9 191 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 SCML1Q9UN30 329 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 NYNRINQ9P2P1 1898 aaKnown RBP11.61□□□□□ -0.55
VDR-208ENST00000550325 TNS1Q9HBL0 1735 aaKnown RBP11.61□□□□□ -0.55
VDR-208ENST00000550325 MGAT4DA6NG13 374 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 PRAMEF11O60813 436 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 HBQ1P09105 142 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 SMPD1P17405 629 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 HTR7P34969 479 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 RPS25P62851 125 aaKnown RBP11.61□□□□□ -0.55
VDR-208ENST00000550325 C9orf62Q8N4C0 152 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 FAM46DQ8NEK8 389 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 AP3S1Q92572 193 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 POP5Q969H6 163 aaKnown RBP11.61□□□□□ -0.55
VDR-208ENST00000550325 SLC22A14Q9Y267 594 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 MRPS7Q9Y2R9 242 aaKnown RBP11.61□□□□□ -0.55
VDR-208ENST00000550325 A0A1W2PRG6 482 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 HYKKA2RU49 373 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 RRN3P2A6NIE6 340 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 CNMDO75829 334 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 LHCGRP22888 699 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 CHI3L1P36222 383 aaPredicted RBP11.61□□□□□ -0.55
VDR-208ENST00000550325 AKR1D1P51857 326 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 CPTPQ5TA50 214 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 FRMPD2BQ6IN97 320 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 USP45Q70EL2 814 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 LIMS2Q7Z4I7 341 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 TRIM46Q7Z4K8 759 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 NMNAT1Q9HAN9 279 aaPredicted RBP11.61□□□□□ -0.55
VDR-208ENST00000550325 SLC28A3Q9HAS3 691 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 B3GAT2Q9NPZ5 323 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 FLRT1Q9NZU1 646 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 TLR6Q9Y2C9 796 aa11.61□□□□□ -0.55
VDR-208ENST00000550325 ANKRD66B4E2M5 251 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 GTPBP1O00178 669 aaKnown RBP11.6□□□□□ -0.55
VDR-208ENST00000550325 HIST1H2AGP0C0S8 130 aaPredicted RBP11.6□□□□□ -0.55
VDR-208ENST00000550325 ICAM2P13598 275 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 HIST1H2ADP20671 130 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 RPS24P62847 133 aaKnown RBP11.6□□□□□ -0.55
VDR-208ENST00000550325 SELENOWP63302 87 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 COX10Q12887 443 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 ATP13A5Q4VNC0 1218 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 COX20Q5RI15 118 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 KLHDC9Q8NEP7 349 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 HIST1H2AHQ96KK5 128 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 HIST1H2AJQ99878 128 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 H2AFJQ9BTM1 129 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 CHIAQ9BZP6 476 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 TM6SF2Q9BZW4 377 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 ERVMER34-1Q9H9K5 563 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 CSNK1G1Q9HCP0 422 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 ATP6V1HQ9UI12 483 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 GSTK1Q9Y2Q3 226 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 LCTP09848 1927 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 ZNF236Q9UL36 1845 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 ARL5CA6NH57 179 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 TMEM88BA6NKF7 163 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 F5H5T6 163 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 PRAMEF12O95522 483 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 EPOP01588 193 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 ZNF30P17039 623 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 PRPS1L1P21108 318 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 BOP1Q14137 746 aaKnown RBP11.6□□□□□ -0.55
VDR-208ENST00000550325 GPR68Q15743 365 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 DEF8Q6ZN54 512 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 SZRD1Q7Z422 152 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 MEX3DQ86XN8 651 aaKnown RBP11.6□□□□□ -0.55
VDR-208ENST00000550325 ZBTB2Q8N680 514 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 TEX26Q8N6G2 289 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 HJURPQ8NCD3 748 aaPredicted RBP11.6□□□□□ -0.55
VDR-208ENST00000550325 FBXO32Q969P5 355 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 TRAF4Q9BUZ4 470 aaPredicted RBP11.6□□□□□ -0.55
VDR-208ENST00000550325 MCCC2Q9HCC0 563 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 SLAMF7Q9NQ25 335 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 PRDM5Q9NQX1 630 aaPredicted RBP11.6□□□□□ -0.55
VDR-208ENST00000550325 CTPS2Q9NRF8 586 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 NUDT15Q9NV35 164 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 PLEKHB1Q9UF11 243 aaPredicted RBP11.6□□□□□ -0.55
VDR-208ENST00000550325 YY2O15391 372 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 SSNA1O43805 119 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 GPX2P18283 190 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 CHIT1Q13231 466 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 SCARB2Q14108 478 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 RGNQ15493 299 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 AANATQ16613 207 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 KLHL22Q53GT1 634 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 ZNF852Q6ZMS4 543 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 APOBEC3FQ8IUX4 373 aaKnown RBP11.6□□□□□ -0.55
VDR-208ENST00000550325 PLPP6Q8IY26 295 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 ART5Q96L15 291 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 SPRTNQ9H040 489 aaPredicted RBP11.6□□□□□ -0.55
VDR-208ENST00000550325 TRPS1Q9UHF7 1281 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 OARD1Q9Y530 152 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 PCDHB11Q9Y5F2 797 aa11.6□□□□□ -0.55
VDR-208ENST00000550325 IQCMA0A1B0GVH7 501 aa11.59□□□□□ -0.55
VDR-208ENST00000550325 SLC30A4O14863 429 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms