RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 NCLNQ969V3 563 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 SGCZQ96LD1 299 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 RASL10BQ96S79 203 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 FAM173AQ9BQD7 235 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 TTTY12Q9BZ98 90 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 RBSNQ9H1K0 784 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 RHBGQ9H310 441 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 IL1RL2Q9HB29 575 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 ADAP2Q9NPF8 381 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 DLL4Q9NR61 685 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 PRTFDC1Q9NRG1 225 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 PNO1Q9NRX1 252 aaKnown RBP9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 ZNF358Q9NW07 568 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 HPF1Q9NWY4 346 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 Q9UFV3 132 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 FAM215AQ9Y5M1 114 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 KCNE2Q9Y6J6 123 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 ABCA4P78363 2273 aa9.14□□□□□ -0.95
TRAFD1-207ENST00000550051 LRIT2A6NDA9 550 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 PABPN1LA6NDY0 278 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 C4orf51C9J302 202 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 FAM47E-STBD1D6RA91 191 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 GOLGA8MH3BSY2 632 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 TGFBR3LH3BV60 316 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 CTNSO60931 367 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 WDR1O75083 606 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 TTC4O95801 387 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 CCDC175P0C221 793 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 GSTM2P28161 218 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 PPP2R2AP63151 447 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 FOXO1Q12778 655 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 SLC10A1Q14973 349 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 RBBP5Q15291 538 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 ELAVL1Q15717 326 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 TOR1AIP1Q5JTV8 583 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 RBM20Q5T481 1227 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 SBSNQ6UWP8 590 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 HSDL2Q6YN16 418 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 C16orf47Q6ZP98 133 aaPredicted RBP9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 RTL4Q6ZR62 310 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 CNTN4Q8IWV2 1026 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 TMEM251Q8N6I4 163 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 MORN4Q8NDC4 146 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 DAZLQ92904 295 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 MBD6Q96DN6 1003 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 MS4A6EQ96DS6 147 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 FAR2Q96K12 515 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 QRFPRQ96P65 431 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 SMC6Q96SB8 1091 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 NAT9Q9BTE0 207 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 POLDIP3Q9BY77 421 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 NT5DC2Q9H857 520 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 RASSF1Q9NS23 344 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 VTI1BQ9UEU0 232 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 CORO1CQ9ULV4 474 aaPredicted RBP9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 SLC22A14Q9Y267 594 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 RPH3AQ9Y2J0 694 aaPredicted RBP9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 VWA7Q9Y334 891 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 DYRK1BQ9Y463 629 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 PCDHGB3Q9Y5G1 929 aa9.13□□□□□ -0.95
TRAFD1-207ENST00000550051 ANKHD1Q8IWZ3 2542 aaKnown RBP9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 ACANP16112 2415 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 FAM166BA8MTA8 275 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 CYR61O00622 381 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 PROM1O43490 865 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 HCN1O60741 890 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 H2AFYO75367 372 aaKnown RBP9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 GUCA1CO95843 209 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 C1GALT1C1LP0DN25 315 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 GABRA1P14867 456 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 PGAM1P18669 254 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 DNASE1P24855 282 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 PPP2R1BP30154 601 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 CXCR5P32302 372 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 ADH7P40394 386 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 SOX3P41225 446 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 KIR2DL3P43628 341 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 HNMTP50135 292 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 HNRNPFP52597 415 aaKnown RBP9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 HK2P52789 917 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 RAB38P57729 211 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 CDKL1Q00532 357 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 SLC13A2Q13183 592 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 BMPR2Q13873 1038 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 CRYMQ14894 314 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 EFTUD2Q15029 972 aaKnown RBP eCLIP9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 DAZAP2Q15038 168 aaPredicted RBP9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 CYP1B1Q16678 543 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 ZNF750Q32MQ0 723 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 ADPRMQ3LIE5 342 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 SPANXN3Q5MJ09 141 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 WLSQ5T9L3 541 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 RIPPLY2Q5TAB7 128 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 OPN5Q6U736 354 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 CAMKMTQ7Z624 323 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 KLHDC8AQ8IYD2 350 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 MMP21Q8N119 569 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 TMEM52Q8NDY8 209 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 C7orf57Q8NEG2 295 aa9.12□□□□□ -0.95
TRAFD1-207ENST00000550051 TTLQ8NG68 377 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms