RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 GPR156Q8NFN8 814 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 OR2L5Q8NG80 312 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 GFM2Q969S9 779 aaKnown RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 TEFMQ96QE5 360 aaKnown RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 SIGLEC11Q96RL6 698 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 FUZQ9BT04 418 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 CXorf36Q9H7Y0 433 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 SLAMF7Q9NQ25 335 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 LYARQ9NX58 379 aaKnown RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 ABCG2Q9UNQ0 655 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 PCDHGB3Q9Y5G1 929 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 TPST1O60507 370 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 GUSBP08236 651 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 CHRM5P08912 532 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 CDH2P19022 906 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 CD247P20963 164 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 CRHBPP24387 322 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 CMPK1P30085 196 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 RABIFP47224 123 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 RPS15AP62244 130 aaKnown RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 UBE2IP63279 158 aaKnown RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 MC1RQ01726 317 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 LRRC23Q53EV4 343 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 COX20Q5RI15 118 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 ANKRD26P1Q6NSI1 321 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 DHRS4L2Q6PKH6 230 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 CHST15Q7LFX5 561 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 FAM124AQ86V42 546 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 RBM12BQ8IXT5 1001 aaKnown RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 KCNC2Q96PR1 638 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 ORAI3Q9BRQ5 295 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 NPLQ9BXD5 320 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 ROGDIQ9GZN7 287 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 MRPS30Q9NP92 439 aaKnown RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 TMEM9Q9P0T7 183 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 ZNF624Q9P2J8 865 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 FAM8A1Q9UBU6 413 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 FAF1Q9UNN5 650 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 TDRKHQ9Y2W6 561 aaKnown RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 ENTPD2Q9Y5L3 495 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 C2CD4DB7Z1M9 353 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 PDPK1O15530 556 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 SUV39H1O43463 412 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 ASNA1O43681 348 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 CPSF4O95639 269 aaKnown RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 ITGA2P17301 1181 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 FUT4P22083 530 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 XCR1P46094 333 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 CSNK2BP67870 215 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 MEF2AQ02078 507 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 C16orf72Q14CZ0 275 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 SKIV2LQ15477 1246 aaKnown RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 LRIT3Q3SXY7 679 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.49□□□□□ -0.896e-7■□□□□ 9.4
RAB5B-206ENST00000549505 TTC33Q6PID6 262 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 ZNF852Q6ZMS4 543 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 CHDHQ8NE62 594 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 SNX19Q92543 992 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 CIDECQ96AQ7 238 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 TAMM41Q96BW9 452 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 ZBED6CLQ96FA7 236 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-206ENST00000549505 FBXL20Q96IG2 436 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 F2RL3Q96RI0 385 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 ABCG4Q9H172 646 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 NDUFAF4Q9P032 175 aa9.49□□□□□ -0.89
RAB5B-206ENST00000549505 A0A1W2PPC1 479 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 PRAMEF26H0Y7S4 382 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 H7BY64 318 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 ADAMDEC1O15204 470 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 IGHV4-34P06331 123 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 DCKP27707 260 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 AKT2P31751 481 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 DAPP51397 102 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 SCARB2Q14108 478 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 IYDQ6PHW0 289 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 ZNF793Q6ZN11 406 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 CYP4Z1Q86W10 505 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 PARP8Q8N3A8 854 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 GAL3ST3Q96A11 431 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 MUS81Q96NY9 551 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 PRAP1Q96NZ9 151 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 BCL7BQ9BQE9 202 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 KCNK12Q9HB15 430 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 POT1Q9NUX5 634 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 CLDND1Q9NY35 253 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 SH3BP4Q9P0V3 963 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 TBC1D29Q9UFV1 150 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 CIDEBQ9UHD4 219 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 TBC1D3DA0A087WVF3 549 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 TBC1D3IA0A087WXS9 549 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 TBC1D3EA0A087X179 549 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 TBC1D3KA0A087X1G2 549 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 LOC100130705A0A1B0GUX0 176 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 TBC1D3FA6NER0 549 aaPredicted RBP9.48□□□□□ -0.89
RAB5B-206ENST00000549505 POM121BA6NF01 834 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 OR5K4A6NMS3 321 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 TBC1D3LB9A6J9 549 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 B4GALT2O60909 372 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 NUDT7P0C024 238 aa9.48□□□□□ -0.89
RAB5B-206ENST00000549505 TBC1D3HP0C7X1 549 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms