RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 HSD3B2P26439 372 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 NDUFS1P28331 727 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 DCTP40126 519 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 QPRTQ15274 297 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 SBSNQ6UWP8 590 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 C6orf120Q7Z4R8 191 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 GALNT7Q86SF2 657 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.61■□□□□ 0.09
CUX1-213ENST00000549414 UBAP1Q9NZ09 502 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 TCRBV3S1A0A5B6 114 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 PRLP01236 227 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 TFPIP10646 304 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 CD72P21854 359 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 AOAHP28039 575 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 CD47Q08722 323 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 OR4C6Q8NH72 309 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 FCGR1BQ92637 280 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 TSACCQ96A04 125 aaPredicted RBP15.61■□□□□ 0.09
CUX1-213ENST00000549414 COQ7Q99807 217 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 STON1Q9Y6Q2 735 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 C7orf72A4D263 438 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 DPP6P42658 865 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 PXNP49023 591 aaPredicted RBP15.6■□□□□ 0.09
CUX1-213ENST00000549414 HK3P52790 923 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 IL18R1Q13478 541 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 SAMD14Q8IZD0 417 aaPredicted RBP15.6■□□□□ 0.09
CUX1-213ENST00000549414 OR6K6Q8NGW6 343 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 SNX33Q8WV41 574 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 RFKQ969G6 155 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 SFXN1Q9H9B4 322 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 PREBQ9HCU5 417 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 WDR45Q9Y484 360 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 RNGTTO60942 597 aaKnown RBP15.6■□□□□ 0.09
CUX1-213ENST00000549414 KCNC4Q03721 635 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 ST3GAL4Q11206 333 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 SLC35F1Q5T1Q4 408 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 TMEM236Q5W0B7 351 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 OR52E8Q6IFG1 317 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 GJD3Q8N144 294 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 METTL27Q8N6F8 245 aaPredicted RBP15.6■□□□□ 0.09
CUX1-213ENST00000549414 ASB11Q8WXH4 323 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 GTF2H4Q92759 462 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 TAMM41Q96BW9 452 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 ITPAQ9BY32 194 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 MS4A12Q9NXJ0 267 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 CABIN1Q9Y6J0 2220 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 MCIDASD6RGH6 385 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 OR7A17O14581 309 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 RPS21P63220 83 aaKnown RBP15.6■□□□□ 0.09
CUX1-213ENST00000549414 VRK3Q8IV63 474 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 CAMKVQ8NCB2 501 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 C16orf78Q8WTQ4 265 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 KLHL6Q8WZ60 621 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 OR2M4Q96R27 311 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 HRASLS2Q9NWW9 162 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 TUBA8Q9NY65 449 aaPredicted RBP15.6■□□□□ 0.09
CUX1-213ENST00000549414 WBP11Q9Y2W2 641 aaKnown RBP15.6■□□□□ 0.09
CUX1-213ENST00000549414 FAM240BA0A1B0GVZ2 78 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 RFXAPO00287 272 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 ADH1BP00325 375 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 UQCRC2P22695 453 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 IL12RB1P42701 662 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 NPRL3Q12980 569 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 PMS2P3Q13401 168 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 SLC30A8Q8IWU4 369 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 RASGEF1AQ8N9B8 481 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 FGF13Q92913 245 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 RAB7BQ96AH8 199 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 NTMT1Q9BV86 223 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 TSSK6Q9BXA6 273 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 HEBP1Q9NRV9 189 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 ALKBH4Q9NXW9 302 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 CYP8B1Q9UNU6 501 aa15.6■□□□□ 0.09
CUX1-213ENST00000549414 NUAK1O60285 661 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 ABLIM3O94929 683 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 CKMT1AP12532 417 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 GRIA2P42262 883 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 HLCSP50747 726 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 HNRNPA1L2Q32P51 320 aaKnown RBP15.59■□□□□ 0.09
CUX1-213ENST00000549414 SHQ1Q6PI26 577 aaKnown RBP15.59■□□□□ 0.09
CUX1-213ENST00000549414 C7orf57Q8NEG2 295 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 METTL21AQ8WXB1 218 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 TOX2Q96NM4 488 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 TPSD1Q9BZJ3 242 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 AGPAT4Q9NRZ5 378 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 TAF4O00268 1085 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 CMPK2Q5EBM0 449 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 GRHL2Q6ISB3 625 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 PLET1Q6UQ28 207 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 ZNF480Q8WV37 535 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 CAMK1GQ96NX5 476 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 GPN3Q9UHW5 284 aaPredicted RBP15.59■□□□□ 0.09
CUX1-213ENST00000549414 CA14Q9ULX7 337 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 ASB1Q9Y576 335 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 SLC35F4A4IF30 521 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 CYP17A1P05093 508 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 NNATQ16517 81 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 SLC36A3Q495N2 470 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 SLC30A6Q6NXT4 461 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 ZNF761Q86XN6 746 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms