RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ANKRD54Q6NXT1 300 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 VITQ6UXI7 678 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 LIPIQ6XZB0 460 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 TCAIMQ8N3R3 496 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 VMP1Q96GC9 406 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 ZFYVE19Q96K21 471 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 COQ10AQ96MF6 247 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 RDH12Q96NR8 316 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 RMND5AQ9H871 391 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 TPT1P8Q9HAU6 139 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 IL1RAPQ9NPH3 570 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 ANKMY1Q9P2S6 941 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 RTTNQ86VV8 2226 aa10.62□□□□□ -0.71
LINC00661-204ENST00000549354 UPK1BO75841 260 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 PTHP01270 115 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 RETP07949 1114 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 ZNF24P17028 368 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 SSTR4P31391 388 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 DNAJA1P31689 397 aaKnown RBP10.61□□□□□ -0.71
LINC00661-204ENST00000549354 OPRD1P41143 372 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 CTSCP53634 463 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 SYT6Q5T7P8 510 aaPredicted RBP10.61□□□□□ -0.71
LINC00661-204ENST00000549354 KDM4DQ6B0I6 523 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 TANGO2Q6ICL3 276 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 PARS2Q7L3T8 475 aaKnown RBP10.61□□□□□ -0.71
LINC00661-204ENST00000549354 PIAS4Q8N2W9 510 aaPredicted RBP10.61□□□□□ -0.71
LINC00661-204ENST00000549354 PARP16Q8N5Y8 322 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 KLK6Q92876 244 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 TP53INP1Q96A56 240 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 RNF31Q96EP0 1072 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 FAM129BQ96TA1 746 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 TMEM45AQ9NWC5 275 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 MSRAQ9UJ68 235 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 SAMD4AQ9UPU9 718 aaKnown RBP10.61□□□□□ -0.71
LINC00661-204ENST00000549354 FRYLO94915 3013 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 M0R082 166 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 SLC16A5O15375 505 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 ERN1O75460 977 aaKnown RBP10.61□□□□□ -0.71
LINC00661-204ENST00000549354 SLC16A8O95907 504 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 CHI3L1P36222 383 aaPredicted RBP10.61□□□□□ -0.71
LINC00661-204ENST00000549354 MRPS15P82914 257 aaKnown RBP10.61□□□□□ -0.71
LINC00661-204ENST00000549354 MAD2L1Q13257 205 aaPredicted RBP10.61□□□□□ -0.71
LINC00661-204ENST00000549354 ACOX1Q15067 660 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 PPP2R2DQ66LE6 453 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 ZNF765Q7L2R6 523 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 NLRP8Q86W28 1048 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 CEP19Q96LK0 163 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 RIOK2Q9BVS4 552 aaKnown RBP10.61□□□□□ -0.71
LINC00661-204ENST00000549354 ITPAQ9BY32 194 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 EHD3Q9NZN3 535 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 TSPAN6O43657 245 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 CCNDBP1O95273 360 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 KCNK5O95279 499 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 CSF2P04141 144 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 ALOX5P09917 674 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 TNNI3P19429 210 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 TGFBR2P37173 567 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 CTSKP43235 329 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 RAB25P57735 213 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 RACK1P63244 317 aaKnown RBP10.61□□□□□ -0.71
LINC00661-204ENST00000549354 HYAL1Q12794 435 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 VMACQ2NL98 169 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 RFX4Q33E94 735 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 ARMCX4Q5H9R4 360 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 ERAP2Q6P179 960 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 SHFQ7M4L6 423 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 CFAP206Q8IYR0 622 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 METTL4Q8N3J2 472 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 SVOPQ8N4V2 548 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 SLC5A8Q8N695 610 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 OR4A15Q8NGL6 344 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 BTN2A2Q8WVV5 523 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 APH1BQ8WW43 257 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 ART5Q96L15 291 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 OR5M11Q96RB7 305 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 KCNH6Q9H252 994 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 ANKRA2Q9H9E1 313 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 TOR4AQ9NXH8 423 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 DUSP12Q9UNI6 340 aa10.61□□□□□ -0.71
LINC00661-204ENST00000549354 OR2A25A4D2G3 310 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 FADS2P1A8MWK0 482 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 RFX3P48380 749 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 RPS13P62277 151 aaKnown RBP10.6□□□□□ -0.71
LINC00661-204ENST00000549354 LSM11P83369 360 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00661-204ENST00000549354 ABHD18Q0P651 414 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 ST3GAL4Q11206 333 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 LRIT3Q3SXY7 679 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 FRG2Q64ET8 278 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 ATG9BQ674R7 924 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 WDR53Q7Z5U6 358 aaPredicted RBP10.6□□□□□ -0.71
LINC00661-204ENST00000549354 CPA6Q8N4T0 437 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 ZFP41Q8N8Y5 198 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 CHFRQ96EP1 664 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 FRG2BQ96QU4 278 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 NIPSNAP1Q9BPW8 284 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 SLC12A9Q9BXP2 914 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 DNAJC27Q9NZQ0 273 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 HCN2Q9UL51 889 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 PCDHGA6Q9Y5G7 932 aa10.6□□□□□ -0.71
LINC00661-204ENST00000549354 NOX1Q9Y5S8 564 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms