RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CSMD2Q7Z408 3487 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 ANKDD1BA6NHY2 528 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 CLDN4O14493 209 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 ADAM10O14672 748 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 CLGNO14967 610 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 PRKNO60260 465 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 STK16O75716 305 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 HPDP32754 393 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 GMPRP36959 345 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 RFC3P40938 356 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 SMSP52788 366 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 MTTPP55157 894 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 GPX6P59796 221 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 E2F2Q14209 437 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 XKR6Q5GH73 641 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 GDF7Q7Z4P5 450 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 MDGA2Q7Z553 956 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 CLNKQ7Z7G1 428 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 SULF2Q8IWU5 870 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 PHF10Q8WUB8 498 aaKnown RBP16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 EXT2Q93063 718 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 KIAA1191Q96A73 305 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 DMRTA2Q96SC8 542 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 TRIM8Q9BZR9 551 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 RUBCNLQ9H714 662 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 COPS7BQ9H9Q2 264 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 PTBP2Q9UKA9 531 aaKnown RBP16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 DAPP1Q9UN19 280 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 ZNF407Q9C0G0 2248 aa16.2■□□□□ 0.18
CHMP1A-205ENST00000548650 DCHS2Q6V1P9 2916 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 TMEM200CA6NKL6 621 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 C19orf84I3L1E1 186 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 TFECO14948 347 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 CLDN14O95500 239 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 COX6B1P14854 86 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 RAB10P61026 200 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 C2orf54Q08AI8 447 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 ELAVL1Q15717 326 aaKnown RBP16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 C3P1Q6ZMU1 363 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 ZNF793Q6ZN11 406 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 C16orf47Q6ZP98 133 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 CYS1Q717R9 158 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 LRRC70Q7Z2Q7 622 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 DOLPP1Q86YN1 238 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 TMEM156Q8N614 296 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 ZFP62Q8NB50 900 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 SPATA4Q8NEY3 305 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 F2RL3Q96RI0 385 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 PHACTR1Q9C0D0 580 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 PRDM7Q9NQW5 492 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 CD274Q9NZQ7 290 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 TEP1Q99973 2627 aaKnown RBP16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 POLQO75417 2590 aa16.19■□□□□ 0.18
CHMP1A-205ENST00000548650 EML6Q6ZMW3 1958 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 SYNDIG1LA6NDD5 238 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 E9PLN8 166 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 PEX1O43933 1283 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 SNRPB2P08579 225 aaKnown RBP16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 KCNC1P48547 511 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 SSR4P51571 173 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 GPR85P60893 370 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 TBCCQ15814 346 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 CMPK2Q5EBM0 449 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 UBE3DQ7Z6J8 389 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 CMC1Q7Z7K0 106 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 C16orf52Q8NHV5 167 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 UBTD2Q8WUN7 234 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 KCNC2Q96PR1 638 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 VKORC1Q9BQB6 163 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 CCDC77Q9BR77 488 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 MS4A8Q9BY19 250 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 ALG9Q9H6U8 611 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 NUDT4Q9NZJ9 180 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 KCMF1Q9P0J7 381 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 RNF112Q9ULX5 631 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 DNAJC13O75165 2243 aa16.18■□□□□ 0.18
CHMP1A-205ENST00000548650 KLRC4-KLRK1H3BQV0 150 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 PRRG2O14669 202 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 HS6ST1O60243 411 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 CCNT2O60583 730 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 FAM155BO75949 473 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 OR2J2O76002 312 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 ZFAND5O76080 213 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 S100BP04271 92 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 GSTA2P09210 222 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 SLC35E2BP0CK96 405 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 MSH2P43246 934 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 TGM3Q08188 693 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 DLG1Q12959 904 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 CHIT1Q13231 466 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 LAPTM5Q13571 262 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 SLMAPQ14BN4 828 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 KBTBD12Q3ZCT8 623 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 PAGE2BQ5JRK9 111 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 C3orf62Q6ZUJ4 267 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 MAATS1Q7Z4T9 603 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 CTAGE3PQ8IX95 158 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 TMEM132CQ8N3T6 1108 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 PSD4Q8NDX1 1056 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 FAM57AQ8TBR7 257 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms