RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 SNRPB2P08579 225 aaKnown RBP27.22■■□□□ 1.95
BRF1-213ENST00000548421 LIM2P55344 173 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 OLR1P78380 273 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 DPY19L1Q2PZI1 675 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 RAB11FIP2Q7L804 512 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 R3HCC1LQ7Z5L2 792 aaKnown RBP27.22■■□□□ 1.95
BRF1-213ENST00000548421 SNX32Q86XE0 403 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 EFCAB3Q8N7B9 438 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 RP9Q8TA86 221 aaKnown RBP27.22■■□□□ 1.95
BRF1-213ENST00000548421 SLC7A5P2Q9GIP4 190 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 CLK4Q9HAZ1 481 aaKnown RBP27.22■■□□□ 1.95
BRF1-213ENST00000548421 TXLNGQ9NUQ3 528 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 MS4A12Q9NXJ0 267 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 DHCR7Q9UBM7 475 aaKnown RBP27.22■■□□□ 1.95
BRF1-213ENST00000548421 NDOR1Q9UHB4 597 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 PCDHB3Q9Y5E6 796 aa27.22■■□□□ 1.95
BRF1-213ENST00000548421 A0A1B0GX78 115 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 COX4I1P13073 169 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 ALAS2P22557 587 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 MC1RQ01726 317 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 EIF3IQ13347 325 aaKnown RBP27.21■■□□□ 1.95
BRF1-213ENST00000548421 CYLC2Q14093 348 aaPredicted RBP27.21■■□□□ 1.95
BRF1-213ENST00000548421 UGT8Q16880 541 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 LARP7Q4G0J3 582 aaKnown RBP eCLIP27.21■■□□□ 1.95
BRF1-213ENST00000548421 NDUFAF5Q5TEU4 345 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 RHBDD2Q6NTF9 364 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 PWWP2BQ6NUJ5 590 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 POU5F2Q8N7G0 328 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 OR5T3Q8NGG3 340 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 MTERF3Q96E29 417 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 MMABQ96EY8 250 aaPredicted RBP27.21■■□□□ 1.95
BRF1-213ENST00000548421 PRPF18Q99633 342 aaKnown RBP27.21■■□□□ 1.95
BRF1-213ENST00000548421 CTRCQ99895 268 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 SLC25A23Q9BV35 468 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 ACTR5Q9H9F9 607 aaPredicted RBP27.21■■□□□ 1.95
BRF1-213ENST00000548421 KCMF1Q9P0J7 381 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 TAGLN3Q9UI15 199 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 CDC14AQ9UNH5 594 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 EXO1Q9UQ84 846 aaKnown RBP27.21■■□□□ 1.95
BRF1-213ENST00000548421 SPACA6W5XKT8 324 aa27.21■■□□□ 1.95
BRF1-213ENST00000548421 LOC100653049A0A140TA62 436 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 PROM1O43490 865 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 KRT34O76011 436 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 TIAF1O95411 115 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 CBX6O95503 412 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 FURINP09958 794 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 COX7A2P14406 83 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 DRD2P14416 443 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 DDCP20711 480 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 BUD31P41223 144 aaPredicted RBP27.2■■□□□ 1.95
BRF1-213ENST00000548421 ZSCAN26Q16670 478 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 FAM174BQ3ZCQ3 159 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 PRMT9Q6P2P2 845 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 CA13Q8N1Q1 262 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 METTL27Q8N6F8 245 aaPredicted RBP27.2■■□□□ 1.95
BRF1-213ENST00000548421 TSPEARQ8WU66 669 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 NUDT8Q8WV74 236 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 SPDL1Q96EA4 605 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 TUBB6Q9BUF5 446 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 MIEF1Q9NQG6 463 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 SLC39A1Q9NY26 324 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 ATP6V1HQ9UI12 483 aa27.2■■□□□ 1.95
BRF1-213ENST00000548421 CNOT1A5YKK6 2376 aaKnown RBP27.2■■□□□ 1.94
BRF1-213ENST00000548421 CROCCQ5TZA2 2017 aa27.2■■□□□ 1.94
BRF1-213ENST00000548421 CCDC187A0A096LP49 1063 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 A0A1W2PR48 441 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 DYTNA2CJ06 578 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 DNAJB6O75190 326 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 AIFM1O95831 613 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 IL6P05231 212 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 HBQ1P09105 142 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 CPN2P22792 545 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 RAB15P59190 212 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 TNFRSF17Q02223 184 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 PDE7AQ13946 482 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 SPANXN4Q5MJ08 99 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 MMP21Q8N119 569 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 CACTIN-AS1Q8N1I8 211 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 NSL1Q96IY1 281 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 C1orf226A1L170 272 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 CCDC154A6NI56 674 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 GABRR3A8MPY1 467 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 CAPN3P20807 821 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 ALDH9A1P49189 494 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 SRSF11Q05519 484 aaKnown RBP27.19■■□□□ 1.94
BRF1-213ENST00000548421 CPTPQ5TA50 214 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 CCDC121Q6ZUS5 278 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 CAMKMTQ7Z624 323 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 OR7A2PQ8NGA2 310 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 PPCDCQ96CD2 204 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 PCDHA9Q9Y5H5 950 aa27.19■■□□□ 1.94
BRF1-213ENST00000548421 FER1L5A0AVI2 2057 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 PIEZO1Q92508 2521 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 CHST10O43529 356 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 PGRP06401 933 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 NR2F6P10588 404 aa27.18■■□□□ 1.94
BRF1-213ENST00000548421 PIM1P11309 404 aaPredicted RBP27.18■■□□□ 1.94
BRF1-213ENST00000548421 ESRRAP11474 423 aaPredicted RBP27.18■■□□□ 1.94
BRF1-213ENST00000548421 DDX5P17844 614 aaKnown RBP27.18■■□□□ 1.94
BRF1-213ENST00000548421 ITIH1P19827 911 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms