RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CFAP47Q6ZTR5 3102 aa16.49■□□□□ 0.23
HDAC7-227ENST00000548080 FAM234BA2RU67 622 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 GYG2O15488 501 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 EFSO43281 561 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 CLEC3AO75596 197 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 LIFP15018 202 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 F8A1P23610 371 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 AHRP35869 848 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 BCL6P41182 706 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 STAT5AP42229 794 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 CORO7P57737 925 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 SNRPNP63162 240 aaKnown RBP16.48■□□□□ 0.23
HDAC7-227ENST00000548080 HKDC1Q2TB90 917 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 DEPDC1Q5TB30 811 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 TTLL10Q6ZVT0 673 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 KIF2BQ8N4N8 673 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 ESX1Q8N693 406 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 C1orf52Q8N6N3 182 aaKnown RBP16.48■□□□□ 0.23
HDAC7-227ENST00000548080 MFSD9Q8NBP5 474 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 RBM15BQ8NDT2 890 aaKnown RBP16.48■□□□□ 0.23
HDAC7-227ENST00000548080 FBXO27Q8NI29 283 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 TSPEARQ8WU66 669 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 CT55Q8WUE5 264 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 MR1Q95460 341 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 C11orf24Q96F05 449 aaPredicted RBP16.48■□□□□ 0.23
HDAC7-227ENST00000548080 TEX37Q96LM6 180 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 MS4A8Q9BY19 250 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 ACTL8Q9H568 366 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 EFCAB1Q9HAE3 211 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 NDOR1Q9UHB4 597 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 IL17BQ9UHF5 180 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 CROTQ9UKG9 612 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 RRP15Q9Y3B9 282 aaKnown RBP16.48■□□□□ 0.23
HDAC7-227ENST00000548080 CFAP73A6NFT4 308 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 NR5A2O00482 541 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 AIM2O14862 343 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 SDC1P18827 310 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 ALAS2P22557 587 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 JAK1P23458 1154 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 IL12AP29459 219 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 POLR2JP52435 117 aaKnown RBP16.48■□□□□ 0.23
HDAC7-227ENST00000548080 KCNK10P57789 538 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 RPS15AP62244 130 aaKnown RBP16.48■□□□□ 0.23
HDAC7-227ENST00000548080 CYP4F2P78329 520 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 COL28A1Q2UY09 1125 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 FAM69BQ5VUD6 431 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 KHDRBS2Q5VWX1 349 aaKnown RBP16.48■□□□□ 0.23
HDAC7-227ENST00000548080 METTL4Q8N3J2 472 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 TRPV3Q8NET8 790 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 RCN3Q96D15 328 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 SLC45A3Q96JT2 553 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 OR2A5Q96R48 311 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 CCNL2Q96S94 520 aaPredicted RBP16.48■□□□□ 0.23
HDAC7-227ENST00000548080 ZBTB18Q99592 522 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 DPY30Q9C005 99 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 CHST8Q9H2A9 424 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 LHX9Q9NQ69 397 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 AHSPQ9NZD4 102 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 BAIAP2L1Q9UHR4 511 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 AP1M2Q9Y6Q5 423 aa16.48■□□□□ 0.23
HDAC7-227ENST00000548080 CCDC88CQ9P219 2028 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 MEN1O00255 615 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 SAP18O00422 153 aaKnown RBP16.47■□□□□ 0.23
HDAC7-227ENST00000548080 SEMA3DO95025 777 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 TBX6O95947 436 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-227ENST00000548080 CCNYL3P0C7X3 344 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 RORAP35398 523 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 CPOXP36551 454 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 DLSTP36957 453 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 ZFP36L2P47974 494 aaKnown RBP16.47■□□□□ 0.23
HDAC7-227ENST00000548080 CLDN8P56748 225 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 RPS18P62269 152 aaKnown RBP16.47■□□□□ 0.23
HDAC7-227ENST00000548080 RAE1P78406 368 aaKnown RBP16.47■□□□□ 0.23
HDAC7-227ENST00000548080 RELAQ04206 551 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 ABHD18Q0P651 414 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 PTGR1Q14914 329 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 MMEL1Q495T6 779 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 DNAL1Q4LDG9 190 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 BROXQ5VW32 411 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 GALNT18Q6P9A2 607 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 VN1R4Q7Z5H5 301 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 DSELQ8IZU8 1212 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 CSNK1A1LQ8N752 337 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 TTC29Q8NA56 475 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-227ENST00000548080 GLB1L3Q8NCI6 653 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-227ENST00000548080 CREB3L4Q8TEY5 395 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-227ENST00000548080 ZNF285Q96NJ3 590 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 NDC1Q9BTX1 674 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 EBPLQ9BY08 206 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 GPN2Q9H9Y4 310 aaPredicted RBP16.47■□□□□ 0.23
HDAC7-227ENST00000548080 SLC52A3Q9NQ40 469 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 CUTCQ9NTM9 273 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 PADI1Q9ULC6 663 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 PCDHGA4Q9Y5G9 962 aa16.47■□□□□ 0.23
HDAC7-227ENST00000548080 DYTNA2CJ06 578 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 BBIP1A8MTZ0 92 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 C9JVG2 144 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 FBP2O00757 339 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 GSC2O15499 205 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms