RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 KLHL33A6NCF5 533 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 FRS3O43559 492 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 SLC28A2O43868 658 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 ADAM23O75077 832 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 ATE1O95260 518 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 CEACAM5P06731 702 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 TYRP1P17643 537 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 GRK3P35626 688 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 ADPRHP54922 357 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 MTAPQ13126 283 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 LASP1Q14847 261 aaKnown RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 C6orf141Q5SZD1 244 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 PRR23BQ6ZRT6 265 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 TRIM48Q8IWZ4 208 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 KAT2AQ92830 837 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 ABTB1Q969K4 478 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 TAMM41Q96BW9 452 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 ISOC1Q96CN7 298 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 APOOQ9BUR5 198 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 NPLQ9BXD5 320 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 HDAC8Q9BY41 377 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 RAD21L1Q9H4I0 556 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 STARD5Q9NSY2 213 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 ASIC5Q9NY37 505 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 ERVK-18Q9QC07 812 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 STK25O00506 426 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 PGRMC2O15173 223 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 FAM20BO75063 409 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 CAPNS1P04632 268 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 RPN2P04844 631 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 OR12D1P0DN82 309 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 MATN1P21941 496 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 CERS1P27544 350 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 CTHP32929 405 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 PPP2R2BQ00005 443 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 LEXMQ3ZCV2 418 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 TJAP1Q5JTD0 557 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 C18orf63Q68DL7 685 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 SLC5A8Q8N695 610 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 HORMAD2Q8N7B1 307 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 FAM81AQ8TBF8 368 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 CXorf40BQ96DE9 158 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 COL21A1Q96P44 957 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 TPSD1Q9BZJ3 242 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 RSPH9Q9H1X1 276 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 ZCCHC3Q9NUD5 404 aaKnown RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 SELENONQ9NZV5 590 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 TRBC2A0A5B9 178 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 HSMCR30P0CW71 290 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 MRPL19P49406 292 aaKnown RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 HOXC5Q00444 222 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 DBPQ10586 325 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 TRIM40Q6P9F5 258 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 SERPINA11Q86U17 422 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 RAB42Q8N4Z0 105 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 CHDHQ8NE62 594 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 LZICQ8WZA0 190 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 OR1E3Q8WZA6 343 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 RAB7BQ96AH8 199 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 C19orf43Q9BQ61 176 aa12.12□□□□□ -0.47
SCAF11-209ENST00000547018 ZNF282Q9UDV7 671 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 TMEFF2Q9UIK5 374 aaPredicted RBP12.12□□□□□ -0.47
SCAF11-209ENST00000547018 TCRBV21S2A2A0A5A6 115 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 H0YJX3 145 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 PCDH17O14917 1159 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 HAT1O14929 419 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 PDPK1O15530 556 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 CHRM5P08912 532 aaPredicted RBP12.11□□□□□ -0.47
SCAF11-209ENST00000547018 NR2F1P10589 423 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 MAGP20916 626 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 CD247P20963 164 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 CALRP27797 417 aaKnown RBP12.11□□□□□ -0.47
SCAF11-209ENST00000547018 MASP1P48740 699 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 NCBP2P52298 156 aaKnown RBP eCLIP12.11□□□□□ -0.471e-18■■■■□ 24.6
SCAF11-209ENST00000547018 CRYBA2P53672 197 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 SLAMF1Q13291 335 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 TMED1Q13445 227 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 SYPL1Q16563 259 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 SYT16Q17RD7 645 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 SMU1Q2TAY7 513 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 NDUFAF5Q5TEU4 345 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 HIPK1Q86Z02 1210 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 METTL4Q8N3J2 472 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 UBE2E3Q969T4 207 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 TEFMQ96QE5 360 aaKnown RBP12.11□□□□□ -0.47
SCAF11-209ENST00000547018 RBCK1Q9BYM8 510 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 LHPPQ9H008 270 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 CD320Q9NPF0 282 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 NDUFA13Q9P0J0 144 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 CLEC1BQ9P126 229 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 GRXCR2A6NFK2 248 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 GPR37L1O60883 481 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 SNRPNP63162 240 aaKnown RBP12.11□□□□□ -0.47
SCAF11-209ENST00000547018 CSNK1G2P78368 415 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 BTN3A2P78410 334 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 EXOC3L2Q2M3D2 409 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 Q6ZS52 159 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 LRRC56Q8IYG6 542 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms