RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ZNF793Q6ZN11 406 aa14.9□□□□□ -0.02
DDX54-204ENST00000546898 UBE3DQ7Z6J8 389 aa14.9□□□□□ -0.02
DDX54-204ENST00000546898 LGI4Q8N135 537 aa14.9□□□□□ -0.02
DDX54-204ENST00000546898 ACOT4Q8N9L9 421 aa14.9□□□□□ -0.02
DDX54-204ENST00000546898 FAM47BQ8NA70 645 aa14.9□□□□□ -0.02
DDX54-204ENST00000546898 ELP5Q8TE02 316 aa14.9□□□□□ -0.02
DDX54-204ENST00000546898 MZB1Q8WU39 189 aa14.9□□□□□ -0.02
DDX54-204ENST00000546898 UBLCP1Q8WVY7 318 aaPredicted RBP14.9□□□□□ -0.02
DDX54-204ENST00000546898 RGMAQ96B86 450 aa14.9□□□□□ -0.02
DDX54-204ENST00000546898 SNRNP40Q96DI7 357 aaKnown RBP14.9□□□□□ -0.02
DDX54-204ENST00000546898 NOL11Q9H8H0 719 aaKnown RBP14.9□□□□□ -0.02
DDX54-204ENST00000546898 ABI3Q9P2A4 366 aa14.9□□□□□ -0.02
DDX54-204ENST00000546898 PTPN13Q12923 2485 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 TRAV17A0A0B4J275 112 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 CYR61O00622 381 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 CDK2AP1O14519 115 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 OR7A17O14581 309 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 ZNF500O60304 480 aaPredicted RBP14.89□□□□□ -0.03
DDX54-204ENST00000546898 SBK3P0C264 359 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 PTX3P26022 381 aaPredicted RBP14.89□□□□□ -0.03
DDX54-204ENST00000546898 ARL1P40616 181 aaPredicted RBP14.89□□□□□ -0.03
DDX54-204ENST00000546898 TRAF3Q13114 568 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 SLC13A2Q13183 592 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 CUL3Q13618 768 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 INAQ16352 499 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 CPSF6Q16630 551 aaKnown RBP eCLIP14.89□□□□□ -0.03
DDX54-204ENST00000546898 MEP1AQ16819 746 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 CYP4X1Q8N118 509 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 TMEM151AQ8N4L1 468 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 SLC5A8Q8N695 610 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 C7orf57Q8NEG2 295 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 OR52B6Q8NGF0 335 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 WDR20Q8TBZ3 569 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 CSF3RQ99062 836 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 MTERF1Q99551 399 aaKnown RBP14.89□□□□□ -0.03
DDX54-204ENST00000546898 OR51B5Q9H339 312 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 ANKZF1Q9H8Y5 726 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 ZBTB26Q9HCK0 441 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 AGPAT4Q9NRZ5 378 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 MAP10Q9P2G4 905 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 RNF11Q9Y3C5 154 aa14.89□□□□□ -0.03
DDX54-204ENST00000546898 COPG1Q9Y678 874 aaKnown RBP14.89□□□□□ -0.03
DDX54-204ENST00000546898 OR5H15A6NDH6 313 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 A8MUI8 341 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 FOXE1O00358 373 aaPredicted RBP14.88□□□□□ -0.03
DDX54-204ENST00000546898 RTCAO00442 366 aaKnown RBP14.88□□□□□ -0.03
DDX54-204ENST00000546898 WDPCPO95876 746 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 HNRNPFP52597 415 aaKnown RBP14.88□□□□□ -0.03
DDX54-204ENST00000546898 RPS13P62277 151 aaKnown RBP14.88□□□□□ -0.03
DDX54-204ENST00000546898 RASA2Q15283 850 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 ZRSR2Q15696 482 aaKnown RBP14.88□□□□□ -0.03
DDX54-204ENST00000546898 ACER2Q5QJU3 275 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 OR4C11Q6IEV9 310 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 TDRPQ86YL5 185 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 CRLF3Q8IUI8 442 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 ZCCHC7Q8N3Z6 543 aaKnown RBP14.88□□□□□ -0.03
DDX54-204ENST00000546898 CISD2Q8N5K1 135 aaKnown RBP14.88□□□□□ -0.03
DDX54-204ENST00000546898 TMEM52Q8NDY8 209 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 NFAM1Q8NET5 270 aaPredicted RBP14.88□□□□□ -0.03
DDX54-204ENST00000546898 SUN3Q8TAQ9 357 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 ZNF483Q8TF39 744 aaPredicted RBP14.88□□□□□ -0.03
DDX54-204ENST00000546898 BARD1Q99728 777 aaKnown RBP14.88□□□□□ -0.03
DDX54-204ENST00000546898 MAPKAP1Q9BPZ7 522 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 ADAP2Q9NPF8 381 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 ASH1LQ9NR48 2969 aaKnown RBP14.88□□□□□ -0.03
DDX54-204ENST00000546898 ASF1BQ9NVP2 202 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 MS4A12Q9NXJ0 267 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 PLA2G3Q9NZ20 509 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 STMN3Q9NZ72 180 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 KCMF1Q9P0J7 381 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 TMEM216Q9P0N5 145 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 TBK1Q9UHD2 729 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 CLDN16Q9Y5I7 305 aa14.88□□□□□ -0.03
DDX54-204ENST00000546898 HIVEP3Q5T1R4 2406 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 SVILO95425 2214 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 PLPP1O14494 284 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 CTNSO60931 367 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 SH3BGRLO75368 114 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 SEMA3DO95025 777 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 OTCP00480 354 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 ELAVL1Q15717 326 aaKnown RBP14.87□□□□□ -0.03
DDX54-204ENST00000546898 FRG2Q64ET8 278 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 SLC22A9Q8IVM8 553 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 BEST3Q8N1M1 668 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 RNF175Q8N4F7 328 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 AMER2Q8N7J2 671 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 CATSPER1Q8NEC5 780 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 B3GNT7Q8NFL0 401 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 MYRIPQ8NFW9 859 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 OR1N1Q8NGS0 311 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 C19orf60Q96EN9 201 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 NSUN5Q96P11 429 aaKnown RBP14.87□□□□□ -0.03
DDX54-204ENST00000546898 CDK15Q96Q40 435 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 FRG2BQ96QU4 278 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.87□□□□□ -0.03
DDX54-204ENST00000546898 SEMA4BQ9NPR2 832 aaPredicted RBP14.87□□□□□ -0.03
DDX54-204ENST00000546898 LYARQ9NX58 379 aaKnown RBP14.87□□□□□ -0.03
DDX54-204ENST00000546898 DCDC2Q9UHG0 476 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 PHF11Q9UIL8 331 aa14.87□□□□□ -0.03
DDX54-204ENST00000546898 PPIEQ9UNP9 301 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms