RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SHISA4Q96DD7 197 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 SORT1Q99523 831 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 SH2B3Q9UQQ2 575 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 HES2Q9Y543 173 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 YJEFN3A6XGL0 299 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 SLC16A5O15375 505 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 JRKO75564 520 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 GNRH1P01148 92 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 S100PP25815 95 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 DLX5P56178 289 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 HSPB3Q12988 150 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 EXOC3L2Q2M3D2 409 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 NOMO2Q5JPE7 1267 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 PLAG1Q6DJT9 500 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 TNFAIP8L2Q6P589 184 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-212ENST00000546744 P2RX7Q99572 595 aaKnown RBP12.34□□□□□ -0.43
PTCH1-212ENST00000546744 OLAHQ9NV23 265 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 MAP10Q9P2G4 905 aa12.34□□□□□ -0.43
PTCH1-212ENST00000546744 ADAMTS3O15072 1205 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 PDGFAP04085 211 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF823P16415 610 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF26P17031 533 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 VAMP1P23763 118 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 RPL35P42766 123 aaKnown RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 FCGRTP55899 365 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 NOL9Q5SY16 702 aaKnown RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF691Q5VV52 312 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 CEACAM20Q6UY09 585 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 GTPBP8Q8N3Z3 284 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 TMEM102Q8N9M5 508 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 GPR151Q8TDV0 419 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 TMEM174Q8WUU8 243 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 PLEKHA1Q9HB21 404 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 MRPL17Q9NRX2 175 aaKnown RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 KLHL9Q9P2J3 617 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 RBM7Q9Y580 266 aaKnown RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 KAT6AQ92794 2004 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 A0A075B6Q4 140 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 A0A0G2JMP0 313 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 CDC7O00311 574 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 SCN2BO60939 215 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 CYB5AP00167 134 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 CDK1P06493 297 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 SMIM10L2AP0DMW4 78 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 SMIM10L2BP0DMW5 78 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 MLLT6P55198 1093 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 EMX1Q04741 257 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 FGL2Q14314 439 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 C22orf42Q6IC83 251 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 FAM117BQ6P1L5 589 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 DHRS4L2Q6PKH6 230 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 C15orf39Q6ZRI6 1047 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 METTL4Q8N3J2 472 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 OR4M2Q8NGB6 313 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 NFKBIDQ8NI38 313 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 WDR48Q8TAF3 677 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 PIGVQ9NUD9 493 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 DNAJC15Q9Y5T4 150 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 A0A1B0GUL6 1792 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 TMEM221A6NGB7 291 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 ELOA3DA6NLF2 546 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 SYN3O14994 580 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 UQCRC2P22695 453 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 CMPK1P30085 196 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 SOX9P48436 509 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 JAG1P78504 1218 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 CDC20Q12834 499 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 ELOA3BQ3SY89 546 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 ATAD3CQ5T2N8 411 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 GLT8D1Q68CQ7 371 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 NXPE1Q8N323 547 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 C1orf52Q8N6N3 182 aaKnown RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 ELOA3Q8NG57 546 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 NDNFQ8TB73 568 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 RAET1EQ8TD07 263 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 PCED1BQ96HM7 432 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 SLC30A3Q99726 388 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 NLE1Q9NVX2 485 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 ZFR2Q9UPR6 939 aaKnown RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 C14orf166Q9Y224 244 aaKnown RBP12.33□□□□□ -0.44
PTCH1-212ENST00000546744 MED31Q9Y3C7 131 aa12.33□□□□□ -0.44
PTCH1-212ENST00000546744 MYH15Q9Y2K3 1946 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 LOC730098B7Z3J9 87 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 FGF19O95750 216 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 CAPN3P20807 821 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 GGT2P36268 569 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 PITPNBP48739 271 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 WNT4P56705 351 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 SCAPQ12770 1279 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 TUBB3Q13509 450 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 USP41Q3LFD5 358 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 ABCA11PQ4W5N1 156 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 TMEM69Q5SWH9 247 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 SIAH1Q8IUQ4 282 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 PARP16Q8N5Y8 322 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 ESAMQ96AP7 390 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 SYT4Q9H2B2 425 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 REEP4Q9H6H4 257 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 NAALAD2Q9Y3Q0 740 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 J3KR12 359 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms