RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CHST14Q8NCH0 376 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 C19orf18Q8NEA5 215 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 SNAPC3Q92966 411 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 SMURF1Q9HCE7 757 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 CCNB1IP1Q9NPC3 277 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 OSGIN1Q9UJX0 560 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 NDRG4Q9ULP0 352 aaKnown RBP14.04□□□□□ -0.16
HOXC11-202ENST00000546378 TRIOO75962 3097 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 TRBV4-1A0A0J9YWV2 114 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 FAM220BPB1ANY3 271 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 SDC2P34741 201 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 HMGCLP35914 325 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 IL12RB1P42701 662 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 BTBD16Q32M84 506 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 IQCCQ4KMZ1 466 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 TRIQKQ629K1 86 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 BEST4Q8NFU0 473 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 CLN6Q9NWW5 311 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 NDUFAF4Q9P032 175 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 OARD1Q9Y530 152 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 SNX11Q9Y5W9 270 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 CHD7Q9P2D1 2997 aa14.04□□□□□ -0.16
HOXC11-202ENST00000546378 FAM240BA0A1B0GVZ2 78 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 NUPL2O15504 423 aaKnown RBP14.03□□□□□ -0.16
HOXC11-202ENST00000546378 EPOP01588 193 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 URODP06132 367 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 C8orf89P0DMQ9 161 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 GPC1P35052 558 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 SPAM1P38567 509 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 BUD31P41223 144 aaPredicted RBP14.03□□□□□ -0.16
HOXC11-202ENST00000546378 TJAP1Q5JTD0 557 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 CEP78Q5JTW2 689 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 ADGRF1Q5T601 910 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 NXPE1Q8N323 547 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 WDR48Q8TAF3 677 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 SLC9A6Q92581 669 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 VMP1Q96GC9 406 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 PDFQ9HBH1 243 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 MRPL15Q9P015 296 aaKnown RBP14.03□□□□□ -0.16
HOXC11-202ENST00000546378 TMCC3Q9ULS5 477 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 SCN5AQ14524 2016 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 M0R3H8 397 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 PDE9AO76083 593 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 CXCR2P25025 360 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 PSMA1P25786 263 aaKnown RBP14.03□□□□□ -0.16
HOXC11-202ENST00000546378 ACRV1P26436 265 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 SLC5A12Q1EHB4 618 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 ZNF385BQ569K4 471 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 GPRC6AQ5T6X5 926 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 PLET1Q6UQ28 207 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 ELMOD2Q8IZ81 293 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 GOLM1Q8NBJ4 401 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 OR5D16Q8NGK9 328 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 TMEM159Q96B96 161 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 C8orf48Q96LL4 319 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 TMEM98Q9Y2Y6 226 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 CCL27Q9Y4X3 112 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 PEX16Q9Y5Y5 336 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 WNT9AO14904 365 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 SMAD9O15198 467 aaKnown RBP14.03□□□□□ -0.16
HOXC11-202ENST00000546378 LATO43561 262 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 PRKRAO75569 313 aaKnown RBP14.03□□□□□ -0.16
HOXC11-202ENST00000546378 CDK1P06493 297 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 OR56A5P0C7T3 313 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 AMD1P17707 334 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 CD22P20273 847 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 AVPR1BP47901 424 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 GPLD1P80108 840 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 FLYWCH1Q4VC44 716 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 ZNF544Q6NX49 715 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 HOMEZQ8IX15 550 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 CFAP206Q8IYR0 622 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 HUS1BQ8NHY5 278 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 BADQ92934 168 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 TOX2Q96NM4 488 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 BTBD2Q9BX70 525 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 UCK2Q9BZX2 261 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 POPDC3Q9HBV1 291 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 ZNF226Q9NYT6 803 aa14.03□□□□□ -0.16
HOXC11-202ENST00000546378 CD8B2A6NJW9 211 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 HRO43593 1189 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 TSPAN6O43657 245 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 SEMA3DO95025 777 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 CD8BP10966 210 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 IL7P13232 177 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 SSTR2P30874 369 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 NRIP1P48552 1158 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 MAN2A2P49641 1150 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 ACVR1Q04771 509 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 RGNQ15493 299 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 SLC46A3Q7Z3Q1 461 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 DDX53Q86TM3 631 aaKnown RBP14.02□□□□□ -0.16
HOXC11-202ENST00000546378 THOC6Q86W42 341 aaKnown RBP14.02□□□□□ -0.16
HOXC11-202ENST00000546378 SLC30A8Q8IWU4 369 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 KLK6Q92876 244 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 FUBP3Q96I24 572 aaKnown RBP eCLIP14.02□□□□□ -0.16
HOXC11-202ENST00000546378 COL21A1Q96P44 957 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 VN1R3Q9BXE9 311 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 FBXO8Q9NRD0 319 aa14.02□□□□□ -0.16
HOXC11-202ENST00000546378 CFAP97Q9P2B7 532 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms