RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CATSPER2Q96P56 530 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 REEP4Q9H6H4 257 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 GIMAP2Q9UG22 337 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 PSME2Q9UL46 239 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 ASB4Q9Y574 426 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 PCDHGA7Q9Y5G6 932 aa15.16■□□□□ 0.02
PRPF40A-212ENST00000545856 FAM234BA2RU67 622 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 BBIP1A8MTZ0 92 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 C4orf51C9J302 202 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 RTCAO00442 366 aaKnown RBP15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 ALBP02768 609 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 GPX3P22352 226 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 MNAT1P51948 309 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 LIM2P55344 173 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 PTGR1Q14914 329 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 OR52E8Q6IFG1 317 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 PWWP2BQ6NUJ5 590 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 TRPM8Q7Z2W7 1104 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 PDSS2Q86YH6 399 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 OR8J2Q8NGG1 315 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 DNAJB8Q8NHS0 232 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 TM4SF18Q96CE8 201 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 GBP5Q96PP8 586 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 MACROD1Q9BQ69 325 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 SLC25A23Q9BV35 468 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 CLMPQ9H6B4 373 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 ZNF304Q9HCX3 659 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 MKKSQ9NPJ1 570 aaPredicted RBP15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 MIEF1Q9NQG6 463 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 C14orf105Q9NVL8 296 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 ATP6V1HQ9UI12 483 aa15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 NXT1Q9UKK6 140 aaKnown RBP15.15■□□□□ 0.02
PRPF40A-212ENST00000545856 IGLV3-12A0A075B6K2 115 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 PCDH17O14917 1159 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 SCAMP2O15127 329 aaKnown RBP15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 NVLO15381 856 aaKnown RBP15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 PROM1O43490 865 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 TMPRSS11DO60235 418 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 HNRNPCL1O60812 293 aaKnown RBP15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 SH3BGRLO75368 114 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 KLK3P07288 261 aaPredicted RBP15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 NR2F6P10588 404 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 AGXTP21549 392 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 RORAP35398 523 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 KCNK10P57789 538 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 TAS2R50P59544 299 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 KLF10Q13118 480 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 PUM1Q14671 1186 aaKnown RBP eCLIP15.14■□□□□ 0.016e-50■■□□□ 11.7
PRPF40A-212ENST00000545856 ZNF595Q8IYB9 648 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 CA13Q8N1Q1 262 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 VPS37AQ8NEZ2 397 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 OR9A4Q8NGU2 314 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 RP9Q8TA86 221 aaKnown RBP15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 TANKQ92844 425 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 ERP27Q96DN0 273 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 FAM122AQ96E09 287 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 MMABQ96EY8 250 aaPredicted RBP15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 TSSK3Q96PN8 268 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 CCDC106Q9BWC9 280 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 EBPLQ9BY08 206 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 TGIF2Q9GZN2 237 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 NRSN2Q9GZP1 204 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 SLC26A1Q9H2B4 701 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 ACTL8Q9H568 366 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 POLR1BQ9H9Y6 1135 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 STARD5Q9NSY2 213 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 KCMF1Q9P0J7 381 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 RAPGEFL1Q9UHV5 662 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 ACSL6Q9UKU0 697 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 MRPS2Q9Y399 296 aaKnown RBP15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 MMACHCQ9Y4U1 282 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 TMEM184BQ9Y519 407 aaPredicted RBP15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 PCDHA9Q9Y5H5 950 aa15.14■□□□□ 0.01
PRPF40A-212ENST00000545856 A0A0A6YYC8 382 aaPredicted RBP15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 CAPN14A8MX76 684 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 I3L1I5 382 aaPredicted RBP15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 EBAG9O00559 213 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 CLDN4O14493 209 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 CFLARO15519 480 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 RRP9O43818 475 aaKnown RBP15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 DXOO77932 396 aaKnown RBP15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 SLITRK5O94991 958 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 IL3P08700 152 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 IFI6P09912 130 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 FURINP09958 794 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 CCL4P13236 92 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 FBLP22087 321 aaKnown RBP15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 CPN2P22792 545 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 TACR1P25103 407 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 PLA2G5P39877 138 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 HNRNPFP52597 415 aaKnown RBP15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 DCDP81605 110 aaKnown RBP15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 C2orf80Q0P641 193 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 TARDBPQ13148 414 aaKnown RBP eCLIP15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 STX5Q13190 355 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 NDUFAF5Q5TEU4 345 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 ANXA8L1Q5VT79 327 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 FAM219BQ5XKK7 198 aa15.13■□□□□ 0.01
PRPF40A-212ENST00000545856 ZNF385CQ66K41 422 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms