RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ANKRD33Q7Z3H0 272 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 CERS3Q8IU89 383 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 OR4Q3Q8NH05 313 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 C11orf52Q96A22 123 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 SPSB1Q96BD6 273 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 PYCR2Q96C36 320 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 XAB2Q9HCS7 855 aaKnown RBP3.5□□□□□ -1.85
SNHG1-224ENST00000545688 PLCL2Q9UPR0 1127 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 KIF25-AS1Q9Y6Z4 181 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 KDM6AO15550 1401 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-224ENST00000545688 AKAP12Q02952 1782 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 TNRC18O15417 2968 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-224ENST00000545688 ITSN1Q15811 1721 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 KIAA1551Q9HCM1 1747 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 PLEKHG2Q9H7P9 1386 aa3.5□□□□□ -1.85
SNHG1-224ENST00000545688 A0A0C4DFX4 3053 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 KAT6BQ8WYB5 2073 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 STARD3NLO95772 234 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 THY1P04216 161 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 HSD17B3P37058 310 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 NDPQ00604 133 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 MLF2Q15773 248 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-224ENST00000545688 RBBP7Q16576 425 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 PRR30Q53SZ7 412 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-224ENST00000545688 C9orf152Q5JTZ5 239 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 ARMC4Q5T2S8 1044 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 LEMD1Q68G75 181 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 PLPPR4Q7Z2D5 763 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 CARM1Q86X55 608 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 POMGNT2Q8NAT1 580 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 AGAP11Q8TF27 550 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 SEPT1Q8WYJ6 367 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 RBM41Q96IZ5 413 aaKnown RBP3.49□□□□□ -1.85
SNHG1-224ENST00000545688 TAAR6Q96RI8 345 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 HNRNPABQ99729 332 aaKnown RBP3.49□□□□□ -1.85
SNHG1-224ENST00000545688 POLKQ9UBT6 870 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 MORF4L1Q9UBU8 362 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 CLIP2Q9UDT6 1046 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 PRO0461Q9UI25 63 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 MKI67P46013 3256 aaKnown RBP3.49□□□□□ -1.85
SNHG1-224ENST00000545688 KCPQ6ZWJ8 1503 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 PIK3C2AO00443 1686 aa3.49□□□□□ -1.85
SNHG1-224ENST00000545688 TTC21AQ8NDW8 1320 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 PASKQ96RG2 1323 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 TOGARAM1Q9Y4F4 1720 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 IGHV3-16A0A0C4DH30 117 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 A0A1W2PQ72 361 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 K7EQG2 157 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 YES1P07947 543 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 STAG3L1P0CL83 205 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 MYL6BP14649 208 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 ACHEP22303 614 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 HMGB2P26583 209 aaKnown RBP3.48□□□□□ -1.85
SNHG1-224ENST00000545688 CLDN17P56750 224 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 BTG1P62324 171 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 ACY1Q03154 408 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 SPANXN4Q5MJ08 99 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 FAM166AQ6J272 317 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 TTC27Q6P3X3 843 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 RBPMS2Q6ZRY4 209 aaKnown RBP3.48□□□□□ -1.85
SNHG1-224ENST00000545688 SMIM5Q71RC9 77 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 PIGWQ7Z7B1 504 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 CCDC63Q8NA47 563 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 XXYLT1Q8NBI6 393 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 OR5M9Q8NGP3 310 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 SERAC1Q96JX3 654 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 SPATA33Q96N06 139 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 IL12RB2Q99665 862 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 RBM24Q9BX46 236 aaKnown RBP3.48□□□□□ -1.85
SNHG1-224ENST00000545688 LRRCC1Q9C099 1032 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 PHPT1Q9NRX4 125 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-224ENST00000545688 PKD2L2Q9NZM6 624 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 ZNF256Q9Y2P7 627 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-224ENST00000545688 COLEC10Q9Y6Z7 277 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 USP54Q70EL1 1684 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 CNTNAP1P78357 1384 aa3.48□□□□□ -1.85
SNHG1-224ENST00000545688 RNF123Q5XPI4 1314 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 KIF13BQ9NQT8 1826 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 NKX6-3A6NJ46 265 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 RPL37AP8A6NKH3 93 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 H3BMM5 538 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 TNFSF12O43508 249 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 MMP10P09238 476 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 GIFP27352 417 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 RIDAP52758 137 aaKnown RBP3.47□□□□□ -1.85
SNHG1-224ENST00000545688 CRY2Q49AN0 593 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 ERMARDQ5T6L9 678 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 GPR139Q6DWJ6 353 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 CCBE1Q6UXH8 406 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-224ENST00000545688 C5orf24Q7Z6I8 188 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 C11orf42Q8N5U0 333 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 MOB1AQ9H8S9 216 aa3.47□□□□□ -1.85
SNHG1-224ENST00000545688 UMODL1Q5DID0 1318 aa3.46□□□□□ -1.85
SNHG1-224ENST00000545688 RGPD5Q99666 1765 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 TRGV8A0A0C4DH27 118 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 E9PAM4 449 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 TXNL1O43396 289 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 FAM200BP0CF97 657 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 CAPZA2P47755 286 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 RAB28P51157 221 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms