RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 LRRC3CA6NJW4 275 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 GPRIN2O60269 458 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 ERN1O75460 977 aaKnown RBP14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 TMIGD3P0DMS9 266 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 COMTP21964 271 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 MC3RP41968 323 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 DUSP8Q13202 625 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 HERC3Q15034 1050 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 FASTKD1Q53R41 847 aaKnown RBP14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 CAPN13Q6MZZ7 669 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 BHLHB9Q6PI77 547 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 ADGRD1Q6QNK2 874 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 RASGEF1CQ8N431 466 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 LIX1Q8N485 282 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 MBD3L2Q8NHZ7 208 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 TMEM171Q8WVE6 324 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 BEX2Q9BXY8 128 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 LZTFL1Q9NQ48 299 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 CAMK2AQ9UQM7 478 aa14.12□□□□□ -0.15
CLSTN3-216ENST00000545663 NBEAL2Q6ZNJ1 2754 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 CD8B2A6NJW9 211 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 TGFBR3LH3BV60 316 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 METTL18O95568 372 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 SOX18P35713 384 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 HK2P52789 917 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 FAM27E3Q08E93 113 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 KCNJ11Q14654 390 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 LRRC25Q8N386 305 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 ZNF321PQ8N8H1 164 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 ZNF441Q8N8Z8 693 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 LRRC57Q8N9N7 239 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 GOLM1Q8NBJ4 401 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 SLC44A1Q8WWI5 657 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 THAP11Q96EK4 314 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 MARK4Q96L34 752 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 SLC30A3Q99726 388 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 NOTCH1P46531 2555 aa14.11□□□□□ -0.15
CLSTN3-216ENST00000545663 GRID2IPA4D2P6 1211 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 PSIP1O75475 530 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 SYF2O95926 243 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 ZNF888P0CJ79 500 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 ALOX12P18054 663 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 CRYGSP22914 178 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 CTNNA2P26232 953 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 CTNNA1P35221 906 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 SLCO1A2P46721 670 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 COPS2P61201 443 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 GBX1Q14549 363 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 ACSBG2Q5FVE4 666 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 CTSL3PQ5NE16 218 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 PRAMEF20Q5VT98 475 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 KATNAL2Q8IYT4 538 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 RCOR2Q8IZ40 523 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 SGCZQ96LD1 299 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 JSRP1Q96MG2 331 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 DOCK7Q96N67 2140 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 PANX3Q96QZ0 392 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 FERMT1Q9BQL6 677 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 PRDM14Q9GZV8 571 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 PROK2Q9HC23 129 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 ZFP64Q9NPA5 681 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 TFR2Q9UP52 801 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 SLC6A5Q9Y345 797 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 CLDN16Q9Y5I7 305 aa14.1□□□□□ -0.15
CLSTN3-216ENST00000545663 MYOCOSA0A1B0GUC4 107 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 KPNA5O15131 536 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 NIPSNAP2O75323 286 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 LRATO95237 230 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 CPOXP36551 454 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 HSD17B2P37059 387 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 RWDD2BP57060 319 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 KCNJ2P63252 427 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 TERF2Q15554 542 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 DCST1Q5T197 706 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 C6orf52Q5T4I8 152 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 TSTD2Q5T7W7 516 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 HSDL2Q6YN16 418 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 C22orf34Q6ZV56 151 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 OR52K1Q8NGK4 314 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 ACTL9Q8TC94 416 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 SLC22A8Q8TCC7 542 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 ANKRD9Q96BM1 317 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 CXorf56Q9H5V9 222 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 ZNF226Q9NYT6 803 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 EFR3BQ9Y2G0 817 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 FREM3P0C091 2139 aa14.09□□□□□ -0.15
CLSTN3-216ENST00000545663 A8MXE2 369 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 NDUFS4O43181 175 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 CEP104O60308 925 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 STK10O94804 968 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 SERPIND1P05546 499 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 SLC35G6P0C7Q6 338 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 CFPP27918 469 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 ACVR1BP36896 505 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 HNF4AP41235 474 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 MARCKSL1P49006 195 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 EIF3BP55884 814 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 BMPR2Q13873 1038 aa14.08□□□□□ -0.16
CLSTN3-216ENST00000545663 KLHL38Q2WGJ6 581 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms