RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 H2AFYO75367 372 aaKnown RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 PIAS1O75925 651 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 MYO1DO94832 1006 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 WDR47O94967 919 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 TBX6O95947 436 aaPredicted RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 ZNF24P17028 368 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 TCP1P17987 556 aaKnown RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 PPP2R1BP30154 601 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 HNRNPH1P31943 449 aaKnown RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 PTGER1P34995 402 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 RFC3P40938 356 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 SLC6A12P48065 614 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 HNMTP50135 292 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 CLCN2P51788 898 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 ARL4CP56559 192 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 PDIA2Q13087 525 aaKnown RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 SLBPQ14493 270 aaKnown RBP eCLIP7.89□□□□□ -1.15
USP28-215ENST00000545608 PRAMEF9Q5VWM5 478 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 C16orf47Q6ZP98 133 aaPredicted RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 SYDE1Q6ZW31 735 aaPredicted RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 MDGA2Q7Z553 956 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 VN1R5Q7Z5H4 357 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 CREG2Q8IUH2 290 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 SCUBE1Q8IWY4 988 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 KLHDC8AQ8IYD2 350 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 SPATA6LQ8N4H0 392 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 FBXO36Q8NEA4 188 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 B3GNT7Q8NFL0 401 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 PHF10Q8WUB8 498 aaKnown RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 CCT6BQ92526 530 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 GAL3ST3Q96A11 431 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 TMEM125Q96AQ2 219 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 RHBDF1Q96CC6 855 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 MS4A6EQ96DS6 147 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 QRFPRQ96P65 431 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 DMRTA2Q96SC8 542 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 MCMBPQ9BTE3 642 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 TRIM31Q9BZY9 425 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 KCNF1Q9H3M0 494 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 LIN28AQ9H9Z2 209 aaKnown RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 BRD7Q9NPI1 651 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 PRTFDC1Q9NRG1 225 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 PNO1Q9NRX1 252 aaKnown RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 CTNNAL1Q9UBT7 734 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 FBXW2Q9UKT8 454 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 KLF13Q9Y2Y9 288 aaPredicted RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 MTO1Q9Y2Z2 717 aaKnown RBP7.89□□□□□ -1.15
USP28-215ENST00000545608 MMACHCQ9Y4U1 282 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 CELSR2Q9HCU4 2923 aa7.89□□□□□ -1.15
USP28-215ENST00000545608 A0A1B0GTH9 108 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 MYOCOSA0A1B0GUC4 107 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 NCF1BA6NI72 391 aaPredicted RBP7.88□□□□□ -1.15
USP28-215ENST00000545608 TMEM200CA6NKL6 621 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 USP27XA6NNY8 438 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 NCF1CA8MVU1 366 aaPredicted RBP7.88□□□□□ -1.15
USP28-215ENST00000545608 E7ESA3 106 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 E9PLN8 166 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 KLRC4-KLRK1H3BQV0 150 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 FCHO1O14526 889 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 PRRG2O14669 202 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 ERI3O43414 337 aaKnown RBP7.88□□□□□ -1.15
USP28-215ENST00000545608 HS6ST1O60243 411 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 ITGA10O75578 1167 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 SEC31AO94979 1220 aaKnown RBP7.88□□□□□ -1.15
USP28-215ENST00000545608 WISP3O95389 354 aaPredicted RBP7.88□□□□□ -1.15
USP28-215ENST00000545608 NCF1P14598 390 aaPredicted RBP7.88□□□□□ -1.15
USP28-215ENST00000545608 GNAZP19086 355 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 TFEBP19484 476 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 NR0B1P51843 470 aaKnown RBP7.88□□□□□ -1.15
USP28-215ENST00000545608 PLA2G16P53816 162 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 RAB38P57729 211 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 KRTAP10-9P60411 292 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 GPR85P60893 370 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 STXBP1P61764 594 aaKnown RBP7.88□□□□□ -1.15
USP28-215ENST00000545608 MRPS25P82663 173 aaKnown RBP7.88□□□□□ -1.15
USP28-215ENST00000545608 DR1Q01658 176 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 TGFBIQ15582 683 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 CMPK2Q5EBM0 449 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 FBXO48Q5FWF7 155 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 SAMD5Q5TGI4 173 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 ADNP2Q6IQ32 1131 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 TMIGD1Q6UXZ0 262 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 ADAMTSL2Q86TH1 951 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 TMEM156Q8N614 296 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 FAM47BQ8NA70 645 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 POGLUT1Q8NBL1 392 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 MYRIPQ8NFW9 859 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 C16orf52Q8NHV5 167 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 NCLNQ969V3 563 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 ESAMQ96AP7 390 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 SDCCAG3Q96C92 435 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 VPS39Q96JC1 886 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 FAR2Q96K12 515 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 VKORC1Q9BQB6 163 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 TMEM79Q9BSE2 394 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 NPLQ9BXD5 320 aaPredicted RBP7.88□□□□□ -1.15
USP28-215ENST00000545608 RHOJQ9H4E5 214 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 C12orf49Q9H741 205 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 NT5DC2Q9H857 520 aa7.88□□□□□ -1.15
USP28-215ENST00000545608 CAB39LQ9H9S4 337 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms