RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 FRMD6-AS1P0C7T7 363 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 FGF5P12034 268 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 LHCGRP22888 699 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 ACP1P24666 158 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 SRD5A2P31213 254 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 CSTF2P33240 577 aaKnown RBP eCLIP3.69□□□□□ -1.82
SNHG1-222ENST00000545308 SFTPDP35247 375 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 CNN1P51911 297 aaKnown RBP3.69□□□□□ -1.82
SNHG1-222ENST00000545308 ZNF132P52740 706 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 DSCR9P59020 149 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 SRP54P61011 504 aaKnown RBP3.69□□□□□ -1.82
SNHG1-222ENST00000545308 CETN1Q12798 172 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 GAGE5Q13069 117 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 GAGE6Q13070 117 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 SQLEQ14534 574 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 KIF19Q2TAC6 998 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 EPC2Q52LR7 807 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 HSP90AB3PQ58FF7 597 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 ZNF542PQ5EBM4 170 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 SLC25A53Q5H9E4 307 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 SLC35D3Q5M8T2 416 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 CAPRIN2Q6IMN6 1127 aaKnown RBP3.69□□□□□ -1.82
SNHG1-222ENST00000545308 GALNT17Q6IS24 598 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 NEK5Q6P3R8 708 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 KIF6Q6ZMV9 814 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 C16orf82Q7Z2V1 217 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 C5orf24Q7Z6I8 188 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 PRUNE1Q86TP1 453 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 HSCBQ8IWL3 235 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 BATF2Q8N1L9 274 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 KBTBD3Q8NAB2 608 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 SMYD1Q8NB12 490 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 ANKRD20A12PQ8NF67 263 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 TMEM185AQ8NFB2 350 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 PIK3R3Q92569 461 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 CFAP36Q96G28 342 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 ZNF479Q96JC4 524 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 IL17FQ96PD4 163 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 PIGQQ9BRB3 760 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 WWTR1Q9GZV5 400 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 NAPBQ9H115 298 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 INTS10Q9NVR2 710 aaKnown RBP3.69□□□□□ -1.82
SNHG1-222ENST00000545308 FAM118AQ9NWS6 357 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 UBQLN2Q9UHD9 624 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 PSORS1C1Q9UIG5 152 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 DNPEPQ9ULA0 475 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 NUDCQ9Y266 331 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 NSG2Q9Y328 171 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 TMED7Q9Y3B3 224 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 R4GN57 208 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 IL16Q14005 1332 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 ANKRD36CQ5JPF3 1778 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 SCN7AQ01118 1682 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 MKI67P46013 3256 aaKnown RBP3.68□□□□□ -1.82
SNHG1-222ENST00000545308 IGLV9-49A0A0B4J1Y8 123 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 TRBV5-5A0A0J9YX44 114 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 A0A1W2PS18 150 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 CFAP73A6NFT4 308 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 PRAC2D3DTV9 90 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 FPGTO14772 594 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 PSMD3O43242 534 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 SMAD6O43541 496 aaKnown RBP3.68□□□□□ -1.82
SNHG1-222ENST00000545308 SMPD2O60906 423 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 MT-ATP6P00846 226 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 PDGFBP01127 241 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-222ENST00000545308 CCDC192P0DO97 292 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 GHRP10912 638 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 AREGP15514 252 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 FERP16591 822 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 HNRNPFP52597 415 aaKnown RBP3.68□□□□□ -1.82
SNHG1-222ENST00000545308 PITX1P78337 314 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-222ENST00000545308 LCP2Q13094 533 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 OPCMLQ14982 345 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 EXT1Q16394 746 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 PDSS1Q5T2R2 415 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 C12orf60Q5U649 245 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 PRAMEF7Q5VXH5 474 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 OR6B2Q6IFH4 312 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 B3GLCTQ6Y288 498 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 WDR88Q6ZMY6 472 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.68□□□□□ -1.82
SNHG1-222ENST00000545308 RCOR2Q8IZ40 523 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 KDM8Q8N371 416 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 CHURC1Q8WUH1 139 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 SLCO4A1Q96BD0 722 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 SAMD8Q96LT4 415 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 C16orf45Q96MC5 204 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-222ENST00000545308 FAM213AQ9BRX8 229 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 NTMT1Q9BV86 223 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 PANK2Q9BZ23 570 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 TMEM245Q9H330 911 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 ZDHHC6Q9H6R6 413 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 CHST11Q9NPF2 352 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 OR6C2Q9NZP2 312 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 KCNN3Q9UGI6 736 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 TSPAN16Q9UKR8 245 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 CCPG1Q9ULG6 757 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 KCNJ14Q9UNX9 436 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 USP16Q9Y5T5 823 aa3.68□□□□□ -1.82
SNHG1-222ENST00000545308 RIC1Q4ADV7 1423 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms