RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 LRRC42Q9Y546 428 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 A0A096LPI6 279 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 CAPN14A8MX76 684 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 EPCAMP16422 314 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 VMACQ2NL98 169 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 TTLL10Q6ZVT0 673 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 ZNF761Q86XN6 746 aaPredicted RBP12.3□□□□□ -0.44
CHD4-211ENST00000544484 CNIH3Q8TBE1 160 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 VEGFDO43915 354 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 CA3P07451 260 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 HTR6P50406 440 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 KLHL26Q53HC5 615 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 MRPL10Q7Z7H8 261 aaKnown RBP12.3□□□□□ -0.44
CHD4-211ENST00000544484 GPAT4Q86UL3 456 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 ERI1Q8IV48 349 aaKnown RBP12.3□□□□□ -0.44
CHD4-211ENST00000544484 OR51G2Q8NGK0 314 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.3□□□□□ -0.442e-6■■■■■ 33
CHD4-211ENST00000544484 OR5P2Q8WZ92 322 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 ASPNQ9BXN1 380 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 MS4A12Q9NXJ0 267 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 PCDHGB1Q9Y5G3 927 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 ZNF670-ZNF695F2Z2N8 137 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 SLC16A5O15375 505 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 ZNF821O75541 412 aaPredicted RBP12.3□□□□□ -0.44
CHD4-211ENST00000544484 SRCP12931 536 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 KCNC4Q03721 635 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 CBLBQ13191 982 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 CEACAM7Q14002 265 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 CATSPEREQ5SY80 951 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 DNM1P34Q6PK57 102 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 XKR5Q6UX68 686 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 SDR16C5Q8N3Y7 309 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 OR51A7Q8NH64 312 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 ZNF689Q96CS4 500 aaPredicted RBP12.3□□□□□ -0.44
CHD4-211ENST00000544484 UPB1Q9UBR1 384 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 NUMA1Q14980 2115 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 ZCWPW2A0A1B0GU75 182 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 PLD2O14939 933 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 HCRTR2O43614 444 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 KCNC1P48547 511 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 FAM214AQ32MH5 1076 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 RANBP10Q6VN20 620 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 AMIGO1Q86WK6 493 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 DNAJA4Q8WW22 397 aaPredicted RBP12.3□□□□□ -0.44
CHD4-211ENST00000544484 MR1Q95460 341 aa12.3□□□□□ -0.44
CHD4-211ENST00000544484 MBLAC1A4D2B0 266 aaPredicted RBP12.29□□□□□ -0.44
CHD4-211ENST00000544484 SMAD9O15198 467 aaKnown RBP12.29□□□□□ -0.44
CHD4-211ENST00000544484 SCO2O43819 266 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 GSTT2BP0CG30 244 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 ACADVLP49748 655 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 OR4D2P58180 307 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 PON2Q15165 354 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 INAVAQ3KP66 663 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 ULK3Q6PHR2 472 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 ISCA2Q86U28 154 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 OR8K5Q8NH50 307 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 OR8K3Q8NH51 312 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 FIBINQ8TAL6 211 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 LOC100509620A0A075B734 347 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 RNF13O43567 381 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 FAM189BP81408 668 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 C4orf46Q504U0 113 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 OR8J3Q8NGG0 315 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 NLGN3Q9NZ94 848 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 APOBEC3BQ9UH17 382 aaKnown RBP12.29□□□□□ -0.44
CHD4-211ENST00000544484 SMAD6O43541 496 aaKnown RBP12.29□□□□□ -0.44
CHD4-211ENST00000544484 CTSAP10619 480 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 OR2B6P58173 313 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 MVKQ03426 396 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 SCGB2B2Q4G0G5 96 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 SHQ1Q6PI26 577 aaKnown RBP12.29□□□□□ -0.44
CHD4-211ENST00000544484 B3GNT9Q6UX72 402 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 C12orf43Q96C57 262 aaKnown RBP12.29□□□□□ -0.44
CHD4-211ENST00000544484 TMEM80Q96HE8 168 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.29□□□□□ -0.44
CHD4-211ENST00000544484 GPR34Q9UPC5 381 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 PCDHGA2Q9Y5H1 932 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 A0A1W2PPW3 197 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 FAM221BA6H8Z2 402 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 PROM1O43490 865 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 JMJD7P0C870 316 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 SLC6A6P31641 620 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 ZNF41P51814 821 aaPredicted RBP12.29□□□□□ -0.44
CHD4-211ENST00000544484 ATG9BQ674R7 924 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 TAS1R1Q7RTX1 841 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 CLECL1Q8IZS7 167 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 FUBP1Q96AE4 644 aaKnown RBP12.29□□□□□ -0.44
CHD4-211ENST00000544484 LDAHQ9H6V9 325 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 KCNK12Q9HB15 430 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 HCSTQ9UBK5 93 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 FAM189A1O60320 539 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 CKMT1AP12532 417 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 KDELR2P33947 212 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 EIF4HQ15056 248 aaKnown RBP12.29□□□□□ -0.44
CHD4-211ENST00000544484 WSCD2Q2TBF2 565 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 NXPE4Q6UWF7 544 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 MGAT4BQ9UQ53 548 aa12.29□□□□□ -0.44
CHD4-211ENST00000544484 C5orf51A6NDU8 294 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 RAB36O95755 333 aa12.28□□□□□ -0.44
CHD4-211ENST00000544484 HLA-DPB1P04440 258 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms