RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 USP9XQ93008 2570 aaPredicted RBP21.79■■□□□ 1.08
CHFR-222ENST00000544093 IQANK1A0A1B0GTG1 560 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 CBX6O95503 412 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 NR6A1Q15406 480 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 DEPDC1Q5TB30 811 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 HORMAD2Q8N7B1 307 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 L3MBTL4Q8NA19 623 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 HUS1BQ8NHY5 278 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 FAR1Q8WVX9 515 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 CCDC77Q9BR77 488 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 L2HGDHQ9H9P8 463 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 ZNF358Q9NW07 568 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 MS4A12Q9NXJ0 267 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 PSD3Q9NYI0 1048 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 PCDHGB6Q9Y5F9 930 aa21.79■■□□□ 1.08
CHFR-222ENST00000544093 ANKUB1A6NFN9 424 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 CYR61O00622 381 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 PRAMEF2O60811 474 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 CLDN9O95484 217 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 TGFB1P01137 390 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 HIST1H1TP22492 207 aaPredicted RBP21.78■■□□□ 1.08
CHFR-222ENST00000544093 ATP5A1P25705 553 aaKnown RBP21.78■■□□□ 1.08
CHFR-222ENST00000544093 PTX3P26022 381 aaPredicted RBP21.78■■□□□ 1.08
CHFR-222ENST00000544093 EEF1DP29692 281 aaKnown RBP21.78■■□□□ 1.08
CHFR-222ENST00000544093 SSR2P43308 183 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 CRLF3Q8IUI8 442 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 BEST3Q8N1M1 668 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 ACOT4Q8N9L9 421 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 ST6GALNAC3Q8NDV1 305 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 GRHL3Q8TE85 626 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.78■■□□□ 1.08
CHFR-222ENST00000544093 ATP6V1E2Q96A05 226 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 RGMAQ96B86 450 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 UTP23Q9BRU9 249 aaKnown RBP21.78■■□□□ 1.08
CHFR-222ENST00000544093 TXLNGYQ9BZA5 131 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 DMRT3Q9NQL9 472 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 PPIEQ9UNP9 301 aaKnown RBP21.78■■□□□ 1.08
CHFR-222ENST00000544093 NTNG1Q9Y2I2 539 aa21.78■■□□□ 1.08
CHFR-222ENST00000544093 HECTD1Q9ULT8 2610 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 DOPEY2Q9Y3R5 2298 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 CTNSO60931 367 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 SIX3O95343 332 aaPredicted RBP21.77■■□□□ 1.08
CHFR-222ENST00000544093 EDN3P14138 238 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 RAP1GDS1P52306 607 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 DDX39BQ13838 428 aaKnown RBP21.77■■□□□ 1.08
CHFR-222ENST00000544093 UBE3DQ7Z6J8 389 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 RPS19BP1Q86WX3 136 aaKnown RBP21.77■■□□□ 1.08
CHFR-222ENST00000544093 FAM47BQ8NA70 645 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 B3GNT7Q8NFL0 401 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 PHF21BQ96EK2 531 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 ADAP2Q9NPF8 381 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 KCMF1Q9P0J7 381 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 PPT2Q9UMR5 302 aa21.77■■□□□ 1.08
CHFR-222ENST00000544093 FOXE1O00358 373 aaPredicted RBP21.76■■□□□ 1.07
CHFR-222ENST00000544093 ARL1P40616 181 aaPredicted RBP21.76■■□□□ 1.07
CHFR-222ENST00000544093 CLCN2P51788 898 aa21.76■■□□□ 1.07
CHFR-222ENST00000544093 CCNG1P51959 295 aa21.76■■□□□ 1.07
CHFR-222ENST00000544093 MRPL49Q13405 166 aaKnown RBP21.76■■□□□ 1.07
CHFR-222ENST00000544093 CUL3Q13618 768 aa21.76■■□□□ 1.07
CHFR-222ENST00000544093 SERTAD2Q14140 314 aa21.76■■□□□ 1.07
CHFR-222ENST00000544093 SLC29A2Q14542 456 aa21.76■■□□□ 1.07
CHFR-222ENST00000544093 CPSF6Q16630 551 aaKnown RBP eCLIP21.76■■□□□ 1.07
CHFR-222ENST00000544093 OR4C11Q6IEV9 310 aa21.76■■□□□ 1.07
CHFR-222ENST00000544093 NFAM1Q8NET5 270 aaPredicted RBP21.76■■□□□ 1.07
CHFR-222ENST00000544093 ACMSDQ8TDX5 336 aa21.76■■□□□ 1.07
CHFR-222ENST00000544093 MTERF1Q99551 399 aaKnown RBP21.76■■□□□ 1.07
CHFR-222ENST00000544093 NTMT1Q9BV86 223 aa21.76■■□□□ 1.07
CHFR-222ENST00000544093 OR51B5Q9H339 312 aa21.76■■□□□ 1.07
CHFR-222ENST00000544093 NOL11Q9H8H0 719 aaKnown RBP21.76■■□□□ 1.07
CHFR-222ENST00000544093 OLAHQ9NV23 265 aa21.76■■□□□ 1.07
CHFR-222ENST00000544093 PSMC3IPQ9P2W1 217 aaPredicted RBP21.76■■□□□ 1.07
CHFR-222ENST00000544093 PCTPQ9UKL6 214 aa21.76■■□□□ 1.07
CHFR-222ENST00000544093 HIVEP3Q5T1R4 2406 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 LRRC14BA6NHZ5 514 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 MYO1DO94832 1006 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 AGFG2O95081 481 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 RASAL1O95294 804 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 CRYABP02511 175 aaKnown RBP21.75■■□□□ 1.07
CHFR-222ENST00000544093 FAM153BP0C7A2 387 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 GCAP28676 217 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 STX4Q12846 297 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 BIKQ13323 160 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 TUBA3CQ13748 450 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 ELAVL1Q15717 326 aaKnown RBP21.75■■□□□ 1.07
CHFR-222ENST00000544093 FAM153CQ494X1 144 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 FCRLBQ6BAA4 426 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 TUBA3EQ6PEY2 450 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 ZNF793Q6ZN11 406 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 ARMC10Q8N2F6 343 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 TMEM132CQ8N3T6 1108 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 ZCCHC7Q8N3Z6 543 aaKnown RBP21.75■■□□□ 1.07
CHFR-222ENST00000544093 DNAJB8Q8NHS0 232 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 PRR7Q8TB68 274 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 VMP1Q96GC9 406 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 CSF3RQ99062 836 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 DEFB126Q9BYW3 111 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 PPCSQ9HAB8 311 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 PNO1Q9NRX1 252 aaKnown RBP21.75■■□□□ 1.07
CHFR-222ENST00000544093 PHF11Q9UIL8 331 aa21.75■■□□□ 1.07
CHFR-222ENST00000544093 FCHO1O14526 889 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms