RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 IL3P08700 152 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 ALDOCP09972 364 aaKnown RBP11.25□□□□□ -0.61
DDB1-223ENST00000543658 NR2F6P10588 404 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 G6PDP11413 515 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 JAK1P23458 1154 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 CD82P27701 267 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 OR1D4P47884 311 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 ATP4BP51164 291 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 LIM2P55344 173 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 NME5P56597 212 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 RAE1P78406 368 aaKnown RBP11.25□□□□□ -0.61
DDB1-223ENST00000543658 SHC2P98077 582 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 TNFRSF17Q02223 184 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 OCA2Q04671 838 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 KLC1Q07866 573 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 C2orf80Q0P641 193 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 DSG2Q14126 1118 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 PDCD4Q53EL6 469 aaKnown RBP11.25□□□□□ -0.61
DDB1-223ENST00000543658 C6orf15Q6UXA7 325 aaPredicted RBP11.25□□□□□ -0.61
DDB1-223ENST00000543658 R3HCC1LQ7Z5L2 792 aaKnown RBP11.25□□□□□ -0.61
DDB1-223ENST00000543658 PDSS2Q86YH6 399 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 CA13Q8N1Q1 262 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 ARHGEF39Q8N4T4 335 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 CLHC1Q8NHS4 586 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 C16orf78Q8WTQ4 265 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 MR1Q95460 341 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 PEX11GQ96HA9 241 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 FCRL1Q96LA6 429 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 LRFN5Q96NI6 719 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 GBP5Q96PP8 586 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 PRPF18Q99633 342 aaKnown RBP11.25□□□□□ -0.61
DDB1-223ENST00000543658 NRSN2Q9GZP1 204 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 LHX9Q9NQ69 397 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 THSD1Q9NS62 852 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 TRPC4Q9UBN4 977 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 DAPP1Q9UN19 280 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 WBP11Q9Y2W2 641 aaKnown RBP11.25□□□□□ -0.61
DDB1-223ENST00000543658 MAP4K5Q9Y4K4 846 aa11.25□□□□□ -0.61
DDB1-223ENST00000543658 C1orf226A1L170 272 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 BLACEA4D250 179 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 PMS2P1A4D2B8 440 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 C9orf172C9J069 976 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 STMND1H3BQB6 276 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 MEN1O00255 615 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 CLDN4O14493 209 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 NVLO15381 856 aaKnown RBP11.24□□□□□ -0.61
DDB1-223ENST00000543658 CHST10O43529 356 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 TMPRSS11DO60235 418 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 LRATO95237 230 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 MED26O95402 600 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 COX7A2P14406 83 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 PRPS1L1P21108 318 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 IL10P22301 178 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 PPP2R1BP30154 601 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 XCR1P46094 333 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 GCGRP47871 477 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 DIO3P55073 304 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 HNRNPH2P55795 449 aaKnown RBP11.24□□□□□ -0.61
DDB1-223ENST00000543658 MAT1AQ00266 395 aaKnown RBP11.24□□□□□ -0.61
DDB1-223ENST00000543658 RUNX2Q13950 521 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 PTGR1Q14914 329 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 NKAIN1Q4KMZ8 207 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 NDUFAF5Q5TEU4 345 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 MARCH9Q86YJ5 346 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 ESX1Q8N693 406 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 AMER3Q8N944 861 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 FAM47BQ8NA70 645 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 GALNT6Q8NCL4 622 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 OR5T3Q8NGG3 340 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 OR51Q1Q8NH59 317 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 GFM2Q969S9 779 aaKnown RBP11.24□□□□□ -0.61
DDB1-223ENST00000543658 PMEPA1Q969W9 287 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 MAPKAP1Q9BPZ7 522 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 RBCK1Q9BYM8 510 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 BRINP2Q9C0B6 783 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 MKKSQ9NPJ1 570 aaPredicted RBP11.24□□□□□ -0.61
DDB1-223ENST00000543658 GIMAP4Q9NUV9 329 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 ATAD3AQ9NVI7 634 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 C14orf105Q9NVL8 296 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 ZIM2Q9NZV7 527 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 ZNF282Q9UDV7 671 aaPredicted RBP11.24□□□□□ -0.61
DDB1-223ENST00000543658 BAIAP2L1Q9UHR4 511 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 PSME2Q9UL46 239 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 COPG1Q9Y678 874 aaKnown RBP11.24□□□□□ -0.61
DDB1-223ENST00000543658 CAPN7Q9Y6W3 813 aa11.24□□□□□ -0.61
DDB1-223ENST00000543658 SEC16AO15027 2179 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 AKAP10O43572 662 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 PRMT3O60678 531 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 SLC22A3O75751 556 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 AIFM1O95831 613 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 CD63P08962 238 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 DRD2P14416 443 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 ZNF28P17035 718 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 SLC5A2P31639 672 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 RORAP35398 523 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 CLDN8P56748 225 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 KCNK10P57789 538 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 ACTN3Q08043 901 aaPredicted RBP11.23□□□□□ -0.61
DDB1-223ENST00000543658 MAP7Q14244 749 aa11.23□□□□□ -0.61
DDB1-223ENST00000543658 MAPRE2Q15555 327 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms