RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 SCUBE1Q8IWY4 988 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 HOMEZQ8IX15 550 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 ZNF595Q8IYB9 648 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 GALNT16Q8N428 558 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 SREK1Q8WXA9 508 aaKnown RBP17.3■□□□□ 0.36
COPS7A-216ENST00000543170 ABHD17AQ96GS6 310 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 MESP1Q9BRJ9 268 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 TUBB6Q9BUF5 446 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 SLC25A18Q9H1K4 315 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 DDX31Q9H8H2 851 aaKnown RBP17.3■□□□□ 0.36
COPS7A-216ENST00000543170 MID1IP1Q9NPA3 183 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 PRDM9Q9NQV7 894 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 ARGLU1Q9NWB6 273 aaPredicted RBP17.3■□□□□ 0.36
COPS7A-216ENST00000543170 MS4A12Q9NXJ0 267 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 KCMF1Q9P0J7 381 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 ADAM29Q9UKF5 820 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 SPACA6W5XKT8 324 aa17.3■□□□□ 0.36
COPS7A-216ENST00000543170 DOCK10Q96BY6 2186 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 A0A0A6YYD5 115 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 SERTM1A2A2V5 107 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 SAP18O00422 153 aaKnown RBP17.29■□□□□ 0.36
COPS7A-216ENST00000543170 MANBAO00462 879 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 CYR61O00622 381 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 CLDN4O14493 209 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 UBFD1O14562 309 aaKnown RBP17.29■□□□□ 0.36
COPS7A-216ENST00000543170 PRMT3O60678 531 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 SH3BGRLO75368 114 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 PDYNP01213 254 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 ALDH3A1P30838 453 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 BSGP35613 385 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 SERPINB5P36952 375 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 CCL11P51671 97 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 HSD17B7P56937 341 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 AP2B1P63010 937 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 EEF1A2Q05639 463 aaKnown RBP17.29■□□□□ 0.36
COPS7A-216ENST00000543170 GALNT1Q10472 559 aaPredicted RBP17.29■□□□□ 0.36
COPS7A-216ENST00000543170 MYBPC3Q14896 1274 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 NSDHLQ15738 373 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 FAAH2Q6GMR7 532 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 LANCL3Q6ZV70 420 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 METTL6Q8TCB7 284 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 CNDP1Q96KN2 507 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 SLC25A23Q9BV35 468 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 GATA5Q9BWX5 397 aaPredicted RBP17.29■□□□□ 0.36
COPS7A-216ENST00000543170 SEMA4CQ9C0C4 833 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 CENPHQ9H3R5 247 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 NMRK1Q9NWW6 199 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 LYARQ9NX58 379 aaKnown RBP17.29■□□□□ 0.36
COPS7A-216ENST00000543170 GPR83Q9NYM4 423 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 AHSPQ9NZD4 102 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 RALYQ9UKM9 306 aaKnown RBP17.29■□□□□ 0.36
COPS7A-216ENST00000543170 SCN2AQ99250 2005 aa17.29■□□□□ 0.36
COPS7A-216ENST00000543170 TCRBV16S1A1N1A0A5B0 115 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 GOLGA6L10A6NI86 522 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 NPHS1O60500 1241 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 B4GALT2O60909 372 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 ULK1O75385 1050 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 ZWINTO95229 277 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 LACTB2Q53H82 288 aaPredicted RBP17.28■□□□□ 0.36
COPS7A-216ENST00000543170 MRM1Q6IN84 353 aaKnown RBP17.28■□□□□ 0.36
COPS7A-216ENST00000543170 RIPOR1Q6ZS17 1223 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 PAGE2Q7Z2X7 111 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 HPS6Q86YV9 775 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 METTL4Q8N3J2 472 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 GBP7Q8N8V2 638 aaPredicted RBP17.28■□□□□ 0.36
COPS7A-216ENST00000543170 FAM47BQ8NA70 645 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 C7orf57Q8NEG2 295 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 FDCSPQ8NFU4 85 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 TSLPQ969D9 159 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 MTFMTQ96DP5 389 aaKnown RBP17.28■□□□□ 0.36
COPS7A-216ENST00000543170 PKNOX2Q96KN3 472 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 CSF3RQ99062 836 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 SMAD5Q99717 465 aaKnown RBP17.28■□□□□ 0.36
COPS7A-216ENST00000543170 MAPKAP1Q9BPZ7 522 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 ZNF160Q9HCG1 818 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 FARSBQ9NSD9 589 aaKnown RBP17.28■□□□□ 0.36
COPS7A-216ENST00000543170 PHF11Q9UIL8 331 aa17.28■□□□□ 0.36
COPS7A-216ENST00000543170 SPTA1P02549 2419 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 OR2W5A6NFC9 320 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 FAM227AF5H4B4 570 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 BPGMP07738 259 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 ICAM2P13598 275 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 H2AFXP16104 143 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-216ENST00000543170 BTG2P78543 158 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 TCHHL1Q5QJ38 904 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-216ENST00000543170 VWA5B1Q5TIE3 1220 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 RNF165Q6ZSG1 346 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 IMMP1LQ96LU5 166 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 PTCHD1Q96NR3 888 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 WDR77Q9BQA1 342 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-216ENST00000543170 MECRQ9BV79 373 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 NUDT9Q9BW91 350 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 SORBS1Q9BX66 1292 aaKnown RBP17.27■□□□□ 0.36
COPS7A-216ENST00000543170 LHPPQ9H008 270 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 TMBIM4Q9HC24 238 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 PRTFDC1Q9NRG1 225 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 C5AR2Q9P296 337 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 SLC12A4Q9UP95 1085 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 TP53TG5Q9Y2B4 290 aa17.27■□□□□ 0.36
COPS7A-216ENST00000543170 EIF4E1BA6NMX2 242 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms