RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 WDPCPO95876 746 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 F12P00748 615 aaPredicted RBP9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ABHD2P08910 425 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PCNAP12004 261 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SERPINB1P30740 379 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TNFSF10P50591 281 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MTTPP55157 894 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RAB38P57729 211 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ZNF33BQ06732 778 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 GTF2H2Q13888 395 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RCN2Q14257 317 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MEP1AQ16819 746 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TSNAXIP1Q2TAA8 658 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TMEM35AQ53FP2 167 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 DEPDC1Q5TB30 811 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 LIPJQ5W064 366 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 GTF2H2CQ6P1K8 395 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 OR7G3Q8NG95 312 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ZNF473Q8WTR7 871 aaKnown RBP9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CMTM7Q96FZ5 175 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SCYL1Q96KG9 808 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MAGEB10Q96LZ2 347 aaPredicted RBP9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 BARD1Q99728 777 aaKnown RBP9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TBCDQ9BTW9 1192 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MS4A8Q9BY19 250 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ROGDIQ9GZN7 287 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RNF32Q9H0A6 362 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.13□□□□□ -0.956e-7■■■□□ 14.9
TNFRSF1A-214ENST00000543048 NECTIN3Q9NQS3 549 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 AGPAT4Q9NRZ5 378 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ZNF358Q9NW07 568 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CPSF2Q9P2I0 782 aaKnown RBP9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MRPS33Q9Y291 106 aaKnown RBP9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PCDHGA11Q9Y5H2 935 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ICE1Q9Y2F5 2266 aa9.13□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SPTBN1Q01082 2364 aaKnown RBP9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 IGKV3D-11A0A0A0MRZ8 115 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TCRBV16S1A1N1A0A5B0 115 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CLEC18AA5D8T8 446 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 A8MUA0 341 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RIPK2O43353 540 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 UGDHO60701 494 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CTNSO60931 367 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SMIM24O75264 130 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TGFB1P01137 390 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FAM153BP0C7A2 387 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MAOAP21397 527 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ATP5A1P25705 553 aaKnown RBP9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PTX3P26022 381 aaPredicted RBP9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PIK3CBP42338 1070 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 UQCRFS1P47985 274 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PIK3CGP48736 1102 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 LIM2P55344 173 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 HSD17B7P56937 341 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SLC26A5P58743 744 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TAS2R50P59544 299 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 AP5B1Q2VPB7 878 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FAM153CQ494X1 144 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TECRLQ5HYJ1 363 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ACER2Q5QJU3 275 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FHL5Q5TD97 284 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ADNP2Q6IQ32 1131 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 GRHL2Q6ISB3 625 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CLEC18BQ6UXF7 455 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TIFABQ6ZNK6 161 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 UBE3DQ7Z6J8 389 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ZNF595Q8IYB9 648 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CNPY4Q8N129 248 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 FAM26EQ8N5C1 309 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PTGR2Q8N8N7 351 aaPredicted RBP9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CLEC18CQ8NCF0 446 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SUN3Q8TAQ9 357 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ELP5Q8TE02 316 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ADAMTS18Q8TE60 1221 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CAVIN3Q969G5 261 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ATP6V1E2Q96A05 226 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 RGMAQ96B86 450 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 REPS1Q96D71 796 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MTBPQ96DY7 904 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 KCNC2Q96PR1 638 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 MRPL57Q9BQC6 102 aaKnown RBP9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 CCDC77Q9BR77 488 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 IPPKQ9H8X2 491 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ACTR8Q9H981 624 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 COPS7BQ9H9Q2 264 aaPredicted RBP9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 LYRM4Q9HD34 91 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PRTFDC1Q9NRG1 225 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 PSD3Q9NYI0 1048 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 KCMF1Q9P0J7 381 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 ABI3Q9P2A4 366 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 DAPP1Q9UN19 280 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 NTNG1Q9Y2I2 539 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 TSC22D4Q9Y3Q8 395 aa9.12□□□□□ -0.95
TNFRSF1A-214ENST00000543048 HECTD1Q9ULT8 2610 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 USP9YO00507 2555 aaPredicted RBP9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SYNDIG1LA6NDD5 238 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 OR5H15A6NDH6 313 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 LRRC14BA6NHZ5 514 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 SAGE2PA6NJ88 616 aa9.11□□□□□ -0.95
TNFRSF1A-214ENST00000543048 H0YIV9 168 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms