RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 RNASE12Q5GAN4 147 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 MFSD4BQ5TF39 518 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 SYCE2Q6PIF2 218 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 IKBIPQ70UQ0 350 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 COMMD6Q7Z4G1 85 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 OR10H4Q8NGA5 316 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 OR9Q2Q8NGE9 314 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 FIBINQ8TAL6 211 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ZFP3Q96NJ6 502 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 EPYCQ99645 322 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 P2RY13Q9BPV8 354 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TRMT61BQ9BVS5 477 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ARHGAP39Q9C0H5 1083 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TMEM27Q9HBJ8 222 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 KLHL42Q9P2K6 505 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 DAPL1A0PJW8 107 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 DUXAA6NLW8 204 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 GABRR3A8MPY1 467 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 MMP20O60882 483 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ALPPP05187 535 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 CELP19835 753 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 CD9P21926 228 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 DAPP51397 102 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 CSTF1Q05048 431 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 IER5LQ5T953 404 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 KLHL36Q8N4N3 616 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TRAM1L1Q8N609 369 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ZNF655Q8N720 491 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ASB11Q8WXH4 323 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 SGIP1Q9BQI5 828 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 AMBRA1Q9C0C7 1298 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 SLC7A5P2Q9GIP4 190 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 PAK6Q9NQU5 681 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 MCUBQ9NWR8 336 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 PHF11Q9UIL8 331 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 UTS2RQ9UKP6 389 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 RIIAD1A6NNX1 92 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 CACNB4O00305 520 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 NUAK1O60285 661 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 SRCP12931 536 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 WASP42768 502 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 CLCNKAP51800 687 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ATP12AP54707 1039 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TBPL1P62380 186 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 PPP2R2BQ00005 443 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 GSTM4Q03013 218 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ST3GAL3Q11203 375 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TRIM71Q2Q1W2 868 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ASB18Q6ZVZ8 466 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 HDDC2Q7Z4H3 204 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 LIMS2Q7Z4I7 341 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 SLAIN1Q8ND83 568 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TTLQ8NG68 377 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 OR4C6Q8NH72 309 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 OR5P2Q8WZ92 322 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 IRF7Q92985 503 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 RERGQ96A58 199 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ARMC5Q96C12 935 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 C1QTNF3Q9BXJ4 246 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 MROQ9BYG7 248 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 AKAP7Q9P0M2 348 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 STOX2Q9P2F5 926 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 BTNL2Q9UIR0 455 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 URB1O60287 2271 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 CLDN24A6NM45 220 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 CPSF4LA6NMK7 179 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 FAM170BA6NMN3 283 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 H7BY64 318 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 FAAHO00519 579 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ERI3O43414 337 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 CPNE3O75131 537 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 GABARAPO95166 117 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 APOL3O95236 402 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 NFATC1O95644 943 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TCF3P15923 654 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 HOXD12P35452 270 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 RPS26P62854 115 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 SKP1P63208 163 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TLE2Q04725 743 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 PCDH1Q08174 1060 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 UAP1L1Q3KQV9 507 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 COL13A1Q5TAT6 717 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 GRHL2Q6ISB3 625 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 PRR23CQ6ZRP0 262 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 C6orf120Q7Z4R8 191 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 RNF175Q8N4F7 328 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ZNF433Q8N7K0 673 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 ASCC1Q8N9N2 400 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 FAM98AQ8NCA5 519 aaKnown RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 DNASE1L2Q92874 299 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 EFHD2Q96C19 240 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 PRAP1Q96NZ9 151 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TBX5Q99593 518 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TMEM246Q9BRR3 403 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TMED9Q9BVK6 235 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 KLF16Q9BXK1 252 aaPredicted RBP7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 SMURF1Q9HCE7 757 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 TNFRSF10DQ9UBN6 386 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 NCKAP1Q9Y2A7 1128 aa7.87□□□□□ -1.15
PRKAB1-207ENST00000542698 IFT52Q9Y366 437 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms