RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 PCBP4P57723 403 aaKnown RBP9.41□□□□□ -0.9
SS18-205ENST00000542420 DSTNP60981 165 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 IL5RAQ01344 420 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 MOGQ16653 247 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 SYT6Q5T7P8 510 aaPredicted RBP9.41□□□□□ -0.9
SS18-205ENST00000542420 PRAMEF8Q5VWM4 474 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 PRAMEF7Q5VXH5 474 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 ANKRD26P1Q6NSI1 321 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 REEP3Q6NUK4 255 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 TMEM64Q6YI46 380 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 VTCN1Q7Z7D3 282 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 ZNF605Q86T29 641 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 SDR16C5Q8N3Y7 309 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 C12orf76Q8N812 135 aaPredicted RBP9.41□□□□□ -0.9
SS18-205ENST00000542420 ATG16L2Q8NAA4 619 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 SFXN5Q8TD22 340 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 ZBED6CLQ96FA7 236 aaPredicted RBP9.41□□□□□ -0.9
SS18-205ENST00000542420 ZFYVE19Q96K21 471 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 SPNS1Q9H2V7 528 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 ANKHQ9HCJ1 492 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 NECTIN3Q9NQS3 549 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 PRDM9Q9NQV7 894 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 TMEM184CQ9NVA4 438 aa9.41□□□□□ -0.9
SS18-205ENST00000542420 HEMK1Q9Y5R4 338 aaPredicted RBP9.41□□□□□ -0.9
SS18-205ENST00000542420 FUOMA2VDF0 154 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 hCG_2039718K7EN88 272 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 TNFRSF11BO00300 401 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 SLC22A1O15245 554 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 OXSR1O95747 527 aaPredicted RBP9.4□□□□□ -0.9
SS18-205ENST00000542420 RPL10P27635 214 aaKnown RBP9.4□□□□□ -0.9
SS18-205ENST00000542420 NDUFS1P28331 727 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 XCR1P46094 333 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 PRDX1Q06830 199 aaKnown RBP9.4□□□□□ -0.9
SS18-205ENST00000542420 NFATC3Q12968 1075 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 NEDD8Q15843 81 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 MICAQ29983 383 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 WASH2PQ6VEQ5 465 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 B3GNT8Q7Z7M8 397 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 FAM124AQ86V42 546 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 SCAIQ8N9R8 606 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 SRFBP1Q8NEF9 429 aaKnown RBP9.4□□□□□ -0.9
SS18-205ENST00000542420 DENND6BQ8NEG7 585 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 NR4A3Q92570 626 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 BORCS5Q969J3 196 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 FKBP10Q96AY3 582 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 CLIP3Q96DZ5 547 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 GABRG3Q99928 467 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 DPH2Q9BQC3 489 aaPredicted RBP9.4□□□□□ -0.9
SS18-205ENST00000542420 FAIM2Q9BWQ8 316 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 SLC6A16Q9GZN6 736 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 LHPPQ9H008 270 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 RIBC2Q9H4K1 309 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 RUBCNLQ9H714 662 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 SLC23A2Q9UGH3 650 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 TAC3Q9UHF0 121 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 KCND3Q9UK17 655 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 ENPP4Q9Y6X5 453 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 TICRRQ7Z2Z1 1910 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 PLXND1Q9Y4D7 1925 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 PRRC2BQ5JSZ5 2229 aaKnown RBP9.4□□□□□ -0.9
SS18-205ENST00000542420 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.4□□□□□ -0.9
SS18-205ENST00000542420 MID1O15344 667 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 NDUFS4O43181 175 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 NDUFS2O75306 463 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 GABARAPO95166 117 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 ATE1O95260 518 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 TBX6O95947 436 aaPredicted RBP9.4□□□□□ -0.9
SS18-205ENST00000542420 NUDT7P0C024 238 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 ETFAP13804 333 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 PRKACGP22612 351 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 RRM2P31350 389 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 GGT2P36268 569 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 PLA2G16P53816 162 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 SMIM11AP58511 58 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 KIAA1024LP59773 190 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 IRF4Q15306 451 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 ZIC1Q15915 447 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 ZNF829Q3KNS6 432 aaPredicted RBP9.4□□□□□ -0.9
SS18-205ENST00000542420 ADPRMQ3LIE5 342 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 ANKDD1AQ495B1 522 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 ANKRD54Q6NXT1 300 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 HDDC3Q8N4P3 179 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 LINC00471Q8N535 108 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 RORBQ92753 470 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 TAMM41Q96BW9 452 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 THAP11Q96EK4 314 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 TPD52L3Q96J77 140 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 PIP5K1AQ99755 562 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 MAPKAP1Q9BPZ7 522 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 KIR3DX1Q9H7L2 352 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 ZDHHC4Q9NPG8 344 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 EXD2Q9NVH0 621 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 PCDHGA2Q9Y5H1 932 aa9.4□□□□□ -0.9
SS18-205ENST00000542420 A0A0A6YYD5 115 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 TOR1BO14657 336 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 RGS10O43665 173 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 PCDH8O95206 1070 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 BCL10O95999 233 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 GRK3P35626 688 aa9.39□□□□□ -0.91
SS18-205ENST00000542420 YAP1P46937 504 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms