RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 HEATR5BQ9P2D3 2071 aa14.12□□□□□ -0.15
DDX55-209ENST00000542286 DYRK3O43781 588 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 EFCAB14O75071 495 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 KCNK2O95069 426 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 PAPLNO95428 1278 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 TBX6O95947 436 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 FPR1P21462 350 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 ZNF763Q0D2J5 394 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 GET4Q7L5D6 327 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 LRRC56Q8IYG6 542 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 POC5Q8NA72 575 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 DNAJB8Q8NHS0 232 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 NIPSNAP1Q9BPW8 284 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 RSPO3Q9BXY4 272 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 SLC6A16Q9GZN6 736 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 XKR8Q9H6D3 395 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 NECTIN3Q9NQS3 549 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 SAGE1Q9NXZ1 904 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 NDUFAF4Q9P032 175 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 DKK3Q9UBP4 350 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 SERGEFQ9UGK8 458 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 RPS6KA6Q9UK32 745 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 IGLON5A6NGN9 336 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 NPIPB8E9PQR5 432 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 NME6O75414 186 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 PRKRAO75569 313 aaKnown RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 SERPIND1P05546 499 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 FURINP09958 794 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 DDX6P26196 483 aaKnown RBP eCLIP14.11□□□□□ -0.15
DDX55-209ENST00000542286 C21orf33P30042 268 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 ARHGDIAP52565 204 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 PNLIPRP1P54315 467 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 HNRNPA1L2Q32P51 320 aaKnown RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 TNFAIP8L2Q6P589 184 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 HEATR4Q86WZ0 1026 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 LYSMD2Q8IV50 215 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 ETFBKMTQ8IXQ9 262 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 FAM9CQ8IZT9 166 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 CACTIN-AS1Q8N1I8 211 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 SLC5A8Q8N695 610 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 CELF5Q8N6W0 485 aaKnown RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 DYNC2LI1Q8TCX1 351 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 PROX1Q92786 737 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 DNASE1L2Q92874 299 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 PPCDCQ96CD2 204 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 RDH12Q96NR8 316 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 ASPSCR1Q9BZE9 553 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 REEP4Q9H6H4 257 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 MARCH7Q9H992 704 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 SLAMF7Q9NQ25 335 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 DEC1Q9P2X7 70 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 SNRNP200O75643 2136 aaKnown RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 H7BY64 318 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 PRAMEF10O60809 474 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 FAM20BO75063 409 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 WBP4O75554 376 aaKnown RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 HOXB3P14651 431 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 CHI3L1P36222 383 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 P2RY2P41231 377 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 NCS1P62166 190 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 CAMK2GQ13555 558 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 SYT16Q17RD7 645 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 SPIN4Q56A73 249 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 UBE2UQ5VVX9 321 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 NXPE4Q6UWF7 544 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 LACC1Q8IV20 430 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 OR7G1Q8NGA0 311 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 PHF10Q8WUB8 498 aaKnown RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 APH1BQ8WW43 257 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 JPH3Q8WXH2 748 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 RAB8BQ92930 207 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 COQ8BQ96D53 544 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 PRAP1Q96NZ9 151 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 DSN1Q9H410 356 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 BRF2Q9HAW0 419 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 CCDC177Q9NQR7 707 aaPredicted RBP14.11□□□□□ -0.15
DDX55-209ENST00000542286 RAB23Q9ULC3 237 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.11□□□□□ -0.15
DDX55-209ENST00000542286 PLEKHM1Q9Y4G2 1056 aa14.11□□□□□ -0.15
DDX55-209ENST00000542286 KIAA1549LQ6ZVL6 1849 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 MYO10Q9HD67 2058 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 UPK1BO75841 260 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 PRNPP04156 253 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 CXCR2P25025 360 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 EIF2DP41214 584 aaKnown RBP14.1□□□□□ -0.15
DDX55-209ENST00000542286 IDH2P48735 452 aaKnown RBP14.1□□□□□ -0.15
DDX55-209ENST00000542286 PRIM2P49643 509 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 NPRL3Q12980 569 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 KLHL17Q6TDP4 642 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 GPR65Q8IYL9 337 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 ADGRF3Q8IZF5 1079 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 ANKRD53Q8N9V6 530 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 VPS37AQ8NEZ2 397 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.1□□□□□ -0.15
DDX55-209ENST00000542286 OR8D1Q8WZ84 308 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 RORBQ92753 470 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 GTPBP3Q969Y2 492 aaKnown RBP14.1□□□□□ -0.15
DDX55-209ENST00000542286 BTBD2Q9BX70 525 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 PCDH17O14917 1159 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 ADH1CP00326 375 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms