RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SLC39A5Q6ZMH5 540 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 NEK10Q6ZWH5 1172 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 RASGEF1AQ8N9B8 481 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 ZNF347Q96SE7 839 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 SLC28A3Q9HAS3 691 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 KRCC1Q9NPI7 259 aaPredicted RBP15.44■□□□□ 0.06
VARS2-212ENST00000542001 POFUT2Q9Y2G5 429 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 CRHBPP24387 322 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 ITPKBP27987 946 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 CNR2P34972 360 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 IL12RB1P42701 662 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 LIPJQ5W064 366 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 MFSD2AQ8NA29 543 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 PDPRQ8NCN5 879 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 RHNO1Q9BSD3 238 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 UCK2Q9BZX2 261 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 IQCMA0A1B0GVH7 501 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 PENKP01210 267 aaPredicted RBP15.43■□□□□ 0.06
VARS2-212ENST00000542001 CRISP3P54108 245 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 HBA1P69905 142 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 GPM6BQ13491 265 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 GINS1Q14691 196 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 PDGFRLQ15198 375 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 QPRTQ15274 297 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 ZNF311Q5JNZ3 666 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 TMEM31Q5JXX7 168 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 C6orf120Q7Z4R8 191 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 TCEAL8Q8IYN2 117 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 ZNF480Q8WV37 535 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 RGMAQ96B86 450 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 C11orf24Q96F05 449 aaPredicted RBP15.43■□□□□ 0.06
VARS2-212ENST00000542001 ZBTB20Q9HC78 741 aaPredicted RBP15.43■□□□□ 0.06
VARS2-212ENST00000542001 TAF8Q7Z7C8 310 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 ZNF420Q8TAQ5 688 aaPredicted RBP15.43■□□□□ 0.06
VARS2-212ENST00000542001 SMPDL3AQ92484 453 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 MGLLQ99685 303 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 OSBPL10Q9BXB5 764 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 OR51E2Q9H255 320 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 INTS6Q9UL03 887 aaKnown RBP15.43■□□□□ 0.06
VARS2-212ENST00000542001 SCN2BO60939 215 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 C1SP09871 688 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 SLC6A11P48066 632 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 CSNK1DP48730 415 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 MAP4K2Q12851 820 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 SFSWAPQ12872 951 aaKnown RBP15.43■□□□□ 0.06
VARS2-212ENST00000542001 RGNQ15493 299 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 DLEU7Q6UYE1 221 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 ASB11Q8WXH4 323 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 TRIB3Q96RU7 358 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 ZNF222Q9UK12 451 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 MKLN1Q9UL63 735 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 SIPA1L1O43166 1804 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 A8MUA0 341 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 ANHXE9PGG2 379 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 SCAMP2O15127 329 aaKnown RBP15.43■□□□□ 0.06
VARS2-212ENST00000542001 CBLP22681 906 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 EPHA2P29317 976 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 TMBIM6P55061 237 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 DEFB134Q4QY38 66 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 SHQ1Q6PI26 577 aaKnown RBP15.43■□□□□ 0.06
VARS2-212ENST00000542001 BEX1Q9HBH7 125 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 MCUBQ9NWR8 336 aa15.43■□□□□ 0.06
VARS2-212ENST00000542001 H0YJX3 145 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 SLC30A4O14863 429 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 TGFBR1P36897 503 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 VEGFBP49765 207 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 PRR5P85299 388 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 SLC5A12Q1EHB4 618 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 C10orf62Q5T681 223 aaPredicted RBP15.42■□□□□ 0.06
VARS2-212ENST00000542001 ZNF783Q6ZMS7 281 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 IGFN1Q86VF2 1251 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 TMEM19Q96HH6 336 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 COQ7Q99807 217 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 TSSK6Q9BXA6 273 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 TMEM9Q9P0T7 183 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 COL11A1P12107 1806 aaPredicted RBP15.42■□□□□ 0.06
VARS2-212ENST00000542001 FAM170BA6NMN3 283 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 CACNG3O60359 315 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 CELP19835 753 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 BCAP31P51572 246 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 ERVFC1P60507 584 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 ZNF155Q12901 538 aaPredicted RBP15.42■□□□□ 0.06
VARS2-212ENST00000542001 SOWAHCQ53LP3 525 aaPredicted RBP15.42■□□□□ 0.06
VARS2-212ENST00000542001 TOR1AIP1Q5JTV8 583 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 ARL9Q6T311 187 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 METTL27Q8N6F8 245 aaPredicted RBP15.42■□□□□ 0.06
VARS2-212ENST00000542001 ATP6V1C2Q8NEY4 427 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 DNAJB8Q8NHS0 232 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 HMGB4Q8WW32 186 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 BADQ92934 168 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 PHOX2BQ99453 314 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 CLMPQ9H6B4 373 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 RC3H2Q9HBD1 1191 aaKnown RBP15.42■□□□□ 0.06
VARS2-212ENST00000542001 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 PCDH17O14917 1159 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 ALOX5P09917 674 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 CSNK2A2P19784 350 aaPredicted RBP15.42■□□□□ 0.06
VARS2-212ENST00000542001 MYBPC3Q14896 1274 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 PARS2Q7L3T8 475 aaKnown RBP15.42■□□□□ 0.06
VARS2-212ENST00000542001 CHMP1BQ7LBR1 199 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms