RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 C2orf74A8MZ97 194 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 PEX1O43933 1283 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 TBX19O60806 448 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 GCM2O75603 506 aaPredicted RBP11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 PRKD3O94806 890 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 AIFM1O95831 613 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 MYF5P13349 255 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 ETFAP13804 333 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 ZNF26P17031 533 aaPredicted RBP11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 IL1RNP18510 177 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 PCBP4P57723 403 aaKnown RBP11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 RPS15AP62244 130 aaKnown RBP11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 RGNQ15493 299 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC5A12Q1EHB4 618 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 VMACQ2NL98 169 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 NDUFAF5Q5TEU4 345 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 CPZQ66K79 652 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 PRSS41Q7RTY9 318 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 GALNT4Q8N4A0 578 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 GOLM1Q8NBJ4 401 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 ICA1LQ8NDH6 482 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 BAHD1Q8TBE0 780 aaPredicted RBP11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 NCLNQ969V3 563 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 FAM162AQ96A26 154 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC22A18Q96BI1 424 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 RNF145Q96MT1 663 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 CIB1Q99828 191 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 MAPKAP1Q9BPZ7 522 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 CHID1Q9BWS9 393 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 ATAD3AQ9NVI7 634 aa11.64□□□□□ -0.55
AP003559.1-201ENST00000540906 A0A0J9YY10 115 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 C7orf72A4D263 438 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 FAM221BA6H8Z2 402 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 EVPLLA8MZ36 301 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 H0YGG7 62 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 SOCS2O14508 198 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 VILLO15195 856 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 AQP9O43315 295 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 PIAS2O75928 621 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 SCELO95171 688 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 SERPINA1P01009 418 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 SMIM10L1P0DMW3 83 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 SOAT1P35610 550 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 RPL3P39023 403 aaKnown RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 FRKP42685 505 aaPredicted RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 ARF3P61204 181 aaPredicted RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 BTN3A2P78410 334 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 BNIP3Q12983 259 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 ELOCQ15369 112 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 DEFB110Q30KQ9 67 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 AASDHQ4L235 1098 aaPredicted RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 CMPK2Q5EBM0 449 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 SLC36A4Q6YBV0 504 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 RNF44Q7L0R7 432 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 C17orf82Q86X59 251 aaPredicted RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 ANKFN1Q8N957 763 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 VPS37AQ8NEZ2 397 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 PPWD1Q96BP3 646 aaKnown RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 SMIM10Q96HG1 83 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 KCNC2Q96PR1 638 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 DUSP15Q9H1R2 295 aaPredicted RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 IL21RQ9HBE5 538 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 FSCN3Q9NQT6 498 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 STARD5Q9NSY2 213 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 DCAF13Q9NV06 445 aaKnown RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 TAS2R9Q9NYW1 312 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 ZNF282Q9UDV7 671 aaPredicted RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 RAPGEFL1Q9UHV5 662 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 POMT2Q9UKY4 750 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 KLK4Q9Y5K2 254 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 GMEB1Q9Y692 573 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 TNRC6BQ9UPQ9 1833 aaKnown RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 TECTAO75443 2155 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 TMEM229AB2RXF0 380 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 PDLIM1O00151 329 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 BCAT2O15382 392 aaPredicted RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 PDPK1O15530 556 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 KIF1CO43896 1103 aaKnown RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 TNFRSF21O75509 655 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 ALPPL2P10696 532 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 BMP2P12643 396 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 IL10P22301 178 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 GSTM2P28161 218 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 RPS26P62854 115 aaKnown RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 OLR1P78380 273 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 HSPB3Q12988 150 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 RUNX2Q13950 521 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 SHBQ15464 509 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 TRIM40Q6P9F5 258 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 GKN2Q86XP6 184 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 RNF130Q86XS8 419 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 MAML2Q8IZL2 1156 aaPredicted RBP11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 TBC1D19Q8N5T2 526 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 ADCY4Q8NFM4 1077 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 CSF3RQ99062 836 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 ASPSCR1Q9BZE9 553 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 NTN4Q9HB63 628 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 CES1P1Q9UKY3 287 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 PCDHGB4Q9UN71 923 aa11.63□□□□□ -0.55
AP003559.1-201ENST00000540906 AP3M1Q9Y2T2 418 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms