RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 QSOX2Q6ZRP7 698 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 RIPOR1Q6ZS17 1223 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 GPRIN3Q6ZVF9 776 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 TRABD2AQ86V40 505 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 SIRT6Q8N6T7 355 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 TMEM52Q8NDY8 209 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 BRIX1Q8TDN6 353 aaKnown RBP8.67□□□□□ -1.02
SNHG1-215ENST00000540904 ADAMTS18Q8TE60 1221 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 TM9SF4Q92544 642 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 CCDC126Q96EE4 140 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 L3HYPDHQ96EM0 354 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 IMMP1LQ96LU5 166 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 MAGEB10Q96LZ2 347 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-215ENST00000540904 CSF3RQ99062 836 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 ROPN1BQ9BZX4 212 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-215ENST00000540904 IQCGQ9H095 443 aaKnown RBP8.67□□□□□ -1.02
SNHG1-215ENST00000540904 ROPN1Q9HAT0 212 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-215ENST00000540904 ZBTB20Q9HC78 741 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-215ENST00000540904 LYRM4Q9HD34 91 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 NECTIN3Q9NQS3 549 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 PRTFDC1Q9NRG1 225 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 FARSBQ9NSD9 589 aaKnown RBP8.67□□□□□ -1.02
SNHG1-215ENST00000540904 KCMF1Q9P0J7 381 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 C5AR2Q9P296 337 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 PTGFRNQ9P2B2 879 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 LGALS13Q9UHV8 139 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 ANAPC2Q9UJX6 822 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 FBXW2Q9UKT8 454 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 DAPP1Q9UN19 280 aa8.67□□□□□ -1.02
SNHG1-215ENST00000540904 SCN3AQ9NY46 2000 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 CCDC88CQ9P219 2028 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 IGKV3D-11A0A0A0MRZ8 115 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 TCRBV16S1A1N1A0A5B0 115 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 A8MUA0 341 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 OR4F21O95013 312 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 GBAP04062 536 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 ITGAMP11215 1152 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 PLA2G2AP14555 144 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 CPA3P15088 417 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 CASRP41180 1078 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 CD97P48960 835 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 NAGLUP54802 743 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 HSD17B7P56937 341 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 AP2B1P63010 937 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 ZNF844Q08AG5 666 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 LCP2Q13094 533 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 CUL3Q13618 768 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 EXT1Q16394 746 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 KRT71Q3SY84 523 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 CFAP157Q5JU67 520 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 C10orf62Q5T681 223 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-215ENST00000540904 PLAG1Q6DJT9 500 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 ISLR2Q6UXK2 745 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 LINC00696Q6ZRV3 163 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 CLNKQ7Z7G1 428 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 HPS6Q86YV9 775 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 ZNF595Q8IYB9 648 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 ZADH2Q8N4Q0 377 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 RBMXL3Q8N7X1 1067 aaKnown RBP8.66□□□□□ -1.02
SNHG1-215ENST00000540904 CDYL2Q8N8U2 506 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 BANPQ8N9N5 519 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 RDH11Q8TC12 318 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 SELENOMQ8WWX9 145 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 ZBTB9Q96C00 473 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 APOPT1Q96IL0 206 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 ZNF382Q96SR6 550 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 HBEGFQ99075 208 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 SERPINI1Q99574 410 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 LPAR4Q99677 370 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 MAPKAP1Q9BPZ7 522 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 WDR77Q9BQA1 342 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-215ENST00000540904 TMEM109Q9BVC6 243 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 TRIM4Q9C037 500 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 EPN3Q9H201 632 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 EPS8L2Q9H6S3 715 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 PNO1Q9NRX1 252 aaKnown RBP8.66□□□□□ -1.02
SNHG1-215ENST00000540904 PSD3Q9NYI0 1048 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 LUZP4Q9P127 313 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 TRPS1Q9UHF7 1281 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 ZNF225Q9UK10 706 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 SNX6Q9UNH7 406 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 SLC12A4Q9UP95 1085 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 MRPS33Q9Y291 106 aaKnown RBP8.66□□□□□ -1.02
SNHG1-215ENST00000540904 PLLPQ9Y342 182 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 MMACHCQ9Y4U1 282 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 SPACA6W5XKT8 324 aa8.66□□□□□ -1.02
SNHG1-215ENST00000540904 BOD1L1Q8NFC6 3051 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 KALRNO60229 2985 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 MYOCOSA0A1B0GUC4 107 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 A8MUI8 341 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 TGFBR3LH3BV60 316 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 PYCARD-AS1I3L0S3 204 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 RGS16O15492 202 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-215ENST00000540904 SPAG7O75391 227 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 EEDO75530 441 aaKnown RBP8.65□□□□□ -1.02
SNHG1-215ENST00000540904 MYO1DO94832 1006 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 SCELO95171 688 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 PDYNP01213 254 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 KRT6AP02538 564 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms