RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 PHF12Q96QT6 1004 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 V9GYQ6 96 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 TCRBV5S2A0A599 114 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 PGRMC2O15173 223 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 STAMBPO95630 424 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 VSX2P58304 361 aaPredicted RBP23.28■■□□□ 1.32
TTC3-225ENST00000540756 C16orf72Q14CZ0 275 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 DEFB134Q4QY38 66 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 PRSS41Q7RTY9 318 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 GPR155Q7Z3F1 870 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 OR5AK3PQ8NH89 298 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 ZFP90Q8TF47 636 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 FIG4Q92562 907 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 GAL3ST3Q96A11 431 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 FAM120BQ96EK7 910 aaKnown RBP23.28■■□□□ 1.32
TTC3-225ENST00000540756 MAPKAP1Q9BPZ7 522 aa23.28■■□□□ 1.32
TTC3-225ENST00000540756 DPH2Q9BQC3 489 aaPredicted RBP23.28■■□□□ 1.32
TTC3-225ENST00000540756 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.28■■□□□ 1.32
TTC3-225ENST00000540756 RHPN2P1A8MT19 583 aa23.27■■□□□ 1.32
TTC3-225ENST00000540756 GGT1P19440 569 aa23.27■■□□□ 1.32
TTC3-225ENST00000540756 OR1D5P58170 312 aa23.27■■□□□ 1.32
TTC3-225ENST00000540756 LRRC36Q1X8D7 754 aa23.27■■□□□ 1.32
TTC3-225ENST00000540756 LPCAT4Q643R3 524 aa23.27■■□□□ 1.32
TTC3-225ENST00000540756 ZFP1Q6P2D0 407 aa23.27■■□□□ 1.32
TTC3-225ENST00000540756 ZCCHC7Q8N3Z6 543 aaKnown RBP23.27■■□□□ 1.32
TTC3-225ENST00000540756 C19orf47Q8N9M1 422 aaKnown RBP23.27■■□□□ 1.32
TTC3-225ENST00000540756 RERGQ96A58 199 aaPredicted RBP23.27■■□□□ 1.32
TTC3-225ENST00000540756 TGM7Q96PF1 710 aa23.27■■□□□ 1.32
TTC3-225ENST00000540756 PKP2Q99959 881 aa23.27■■□□□ 1.32
TTC3-225ENST00000540756 WBP11Q9Y2W2 641 aaKnown RBP23.27■■□□□ 1.32
TTC3-225ENST00000540756 A0A1W2PS29 197 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 SMIM10L1P0DMW3 83 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 IL1RNP18510 177 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.26■■□□□ 1.313e-6■■■■■ 28.8
TTC3-225ENST00000540756 PQLC1Q8N2U9 271 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 SRFBP1Q8NEF9 429 aaKnown RBP23.26■■□□□ 1.31
TTC3-225ENST00000540756 GOT1L1Q8NHS2 421 aaPredicted RBP23.26■■□□□ 1.31
TTC3-225ENST00000540756 NCSTNQ92542 709 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 SMIM10Q96HG1 83 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 GPATCH2Q9NW75 528 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 KLHL3Q9UH77 587 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 VPS4AQ9UN37 437 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 AP4S1Q9Y587 144 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 ELOVL7A1L3X0 281 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 AQP12BA6NM10 295 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 PATE3B3GLJ2 98 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 FKBP9O95302 570 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 AIFM1O95831 613 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 NUDT7P0C024 238 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 GPX2P18283 190 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 PTGER1P34995 402 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 ARRB1P49407 418 aaPredicted RBP23.26■■□□□ 1.31
TTC3-225ENST00000540756 TRA2BP62995 288 aaKnown RBP23.26■■□□□ 1.31
TTC3-225ENST00000540756 OLR1P78380 273 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 RELAQ04206 551 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 ZNF750Q32MQ0 723 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 KLHL35Q6PF15 583 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 AQP12AQ8IXF9 295 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 CAMKVQ8NCB2 501 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 AURKCQ9UQB9 309 aa23.26■■□□□ 1.31
TTC3-225ENST00000540756 ZNF860A6NHJ4 632 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 EVPLLA8MZ36 301 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 ZCCHC18P0CG32 403 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 GCKP35557 465 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 RXRGP48443 463 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 PCBP4P57723 403 aaKnown RBP23.25■■□□□ 1.31
TTC3-225ENST00000540756 CYP51A1Q16850 503 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 COX20Q5RI15 118 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.25■■□□□ 1.31
TTC3-225ENST00000540756 MICU2Q8IYU8 434 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 ARL10Q8N8L6 244 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 OR2I1PQ8NGU4 316 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 THAP11Q96EK4 314 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 SLC35A5Q9BS91 424 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 CXorf36Q9H7Y0 433 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 TAS2R9Q9NYW1 312 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 UTS2RQ9UKP6 389 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 PCDHGB4Q9UN71 923 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 CSNK1G3Q9Y6M4 447 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 DHRS12A0PJE2 317 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 FAM220BPB1ANY3 271 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 PDPK1O15530 556 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 CFIP05156 583 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 SLC7A1P30825 629 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 ABHD18Q0P651 414 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 SIM2Q14190 667 aaPredicted RBP23.25■■□□□ 1.31
TTC3-225ENST00000540756 HLA-BQ31612 363 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 ZCCHC8Q6NZY4 707 aaKnown RBP23.25■■□□□ 1.31
TTC3-225ENST00000540756 CEP68Q76N32 757 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 PROSER1Q86XN7 944 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 KBTBD2Q8IY47 623 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 ADGRG5Q8IZF4 528 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 CSNK1A1LQ8N752 337 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 Q8N9G6 341 aaPredicted RBP23.25■■□□□ 1.31
TTC3-225ENST00000540756 KLHL6Q8WZ60 621 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 TRIM15Q9C019 465 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 MUC13Q9H3R2 512 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 MAGEL2Q9UJ55 1249 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 RIMS3Q9UJD0 308 aa23.25■■□□□ 1.31
TTC3-225ENST00000540756 IGHV5-51A0A0C4DH38 117 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms