RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 PCDHGA4Q9Y5G9 962 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 BOD1L1Q8NFC6 3051 aa10.06□□□□□ -0.8
ATL3-204ENST00000540699 PIEZO2Q9H5I5 2752 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 LOC105369274A0A096LPK9 316 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 LOC102723532A0A0G2JNH3 316 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 A0A0J9YVX5 310 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 CYSRT1A8MQ03 144 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 BBIP1A8MTZ0 92 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 GYG2O15488 501 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 ZSCAN9O15535 394 aaPredicted RBP10.05□□□□□ -0.8
ATL3-204ENST00000540699 ZNF749O43361 778 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 RAD1O60671 282 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 CPNE3O75131 537 aaKnown RBP10.05□□□□□ -0.8
ATL3-204ENST00000540699 SLC22A3O75751 556 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 ONECUT2O95948 504 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 KRT16P08779 473 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 HBQ1P09105 142 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 PRPS2P11908 318 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 PCSK2P16519 638 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 SDC1P18827 310 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 TACR1P25103 407 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 AHRP35869 848 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 VSX2P58304 361 aaPredicted RBP10.05□□□□□ -0.8
ATL3-204ENST00000540699 SLC25A3Q00325 362 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 TLE3Q04726 772 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 STX5Q13190 355 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 CLN3Q13286 438 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 CUL3Q13618 768 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 DDX39BQ13838 428 aaKnown RBP10.05□□□□□ -0.8
ATL3-204ENST00000540699 RPS6KA2Q15349 733 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 DNAL1Q4LDG9 190 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 COQ5Q5HYK3 327 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 WASHC2DQ5SRD0 308 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 ZNF385CQ66K41 422 aaPredicted RBP10.05□□□□□ -0.8
ATL3-204ENST00000540699 RHBDD2Q6NTF9 364 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 NOXRED1Q6NXP6 359 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 C8orf82Q6P1X6 216 aaPredicted RBP10.05□□□□□ -0.8
ATL3-204ENST00000540699 GALNT18Q6P9A2 607 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 VN1R4Q7Z5H5 301 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 TMEM126BQ8IUX1 230 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 GPR135Q8IZ08 494 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 OR4N4Q8N0Y3 316 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 LIX1Q8N485 282 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 MFSD9Q8NBP5 474 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 SLC38A9Q8NBW4 561 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 N4BP2L2Q92802 583 aaPredicted RBP10.05□□□□□ -0.8
ATL3-204ENST00000540699 NKD1Q969G9 470 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 TM4SF19Q96DZ7 209 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 MS4A8Q9BY19 250 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 DPH1Q9BZG8 443 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.05□□□□□ -0.8
ATL3-204ENST00000540699 SRPK3Q9UPE1 567 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 SCN3AQ9NY46 2000 aa10.05□□□□□ -0.8
ATL3-204ENST00000540699 BSNQ9UPA5 3926 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 TEX51A0A1B0GUA7 166 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 FEZF1A0PJY2 475 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 FAM234BA2RU67 622 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 ASPDHA6ND91 283 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 C9JVG2 144 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 NR5A2O00482 541 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 TXNDC9O14530 226 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 TERTO14746 1132 aaKnown RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 LCMT2O60294 686 aaKnown RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 SEMA3DO95025 777 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 PLA2G2AP14555 144 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 GSTM2P28161 218 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 MAPK1P28482 360 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 GRK3P35626 688 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 BCL6P41182 706 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 NUDT2P50583 147 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 ARSFP54793 590 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 CLDN8P56748 225 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 C21orf58P58505 322 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 PHEXP78562 749 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 ACSM2AQ08AH3 577 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 ABHD18Q0P651 414 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 GRM7Q14831 915 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 PTGR1Q14914 329 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 RBBP5Q15291 538 aaKnown RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 SPIN4Q56A73 249 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 MANEAQ5SRI9 462 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 PRAMEF17Q5VTA0 474 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 GARNL3Q5VVW2 1013 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 ACSM2BQ68CK6 577 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 C6orf15Q6UXA7 325 aaPredicted RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 HACD2Q6Y1H2 254 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 GPR155Q7Z3F1 870 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 ADCK2Q7Z695 626 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 RETREG3Q86VR2 466 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 PLD3Q8IV08 490 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 DSELQ8IZU8 1212 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 NLGN4XQ8N0W4 816 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 METTL4Q8N3J2 472 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 ESX1Q8N693 406 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 C1orf52Q8N6N3 182 aaKnown RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 ZNF655Q8N720 491 aaPredicted RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 CSNK1A1LQ8N752 337 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 GALNT6Q8NCL4 622 aa10.04□□□□□ -0.8
ATL3-204ENST00000540699 NLGN4YQ8NFZ3 816 aaPredicted RBP10.04□□□□□ -0.8
ATL3-204ENST00000540699 TTLQ8NG68 377 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms