RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CEP68Q76N32 757 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 FAM20CQ8IXL6 584 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 CADM2Q8N3J6 435 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 DNASE1L2Q92874 299 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 SLC12A9Q9BXP2 914 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 NTN4Q9HB63 628 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 MN1Q10571 1320 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-203ENST00000540357 HHLA1C9JL84 531 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 PDCD5O14737 125 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 IL1AP01583 271 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 CAPNS1P04632 268 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 CPN2P22792 545 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 RHAGQ02094 409 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 TRIM46Q7Z4K8 759 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 PSD4Q8NDX1 1056 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 GNPDA2Q8TDQ7 276 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 SNAPC3Q92966 411 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 MAL2Q969L2 176 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 IL17CQ9P0M4 197 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 M0R233 179 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 ALPPP05187 535 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 HNF1BP35680 557 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF81P51508 661 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 SELENBP1Q13228 472 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 GTF2IRD2BQ6EKJ0 949 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 GTF2IRD2Q86UP8 949 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 FBXO22Q8NEZ5 403 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 OR9Q2Q8NGE9 314 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 METTL2AQ96IZ6 378 aaKnown RBP12.5□□□□□ -0.41
DNMT1-203ENST00000540357 PCBD2Q9H0N5 130 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 ZSCAN32Q9NX65 697 aa12.5□□□□□ -0.41
DNMT1-203ENST00000540357 MTMR11A4FU01 709 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 FAM170BA6NMN3 283 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 ALX3O95076 343 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 GPR19Q15760 415 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 XKR4Q5GH76 650 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 GARNL3Q5VVW2 1013 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 VN1R5Q7Z5H4 357 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 UBQLNLQ8IYU4 475 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 NAGSQ8N159 534 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 NPLOC4Q8TAT6 608 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 HMGCLL1Q8TB92 370 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 MSANTD3Q96H12 275 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 HOXD1Q9GZZ0 328 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 NMNAT1Q9HAN9 279 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 NDRG4Q9ULP0 352 aaKnown RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 GTF2A1LQ9UNN4 478 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 NME7Q9Y5B8 376 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 ACADMP11310 421 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 SF3A2Q15428 464 aaKnown RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 CLEC12AQ5QGZ9 265 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 GPRC6AQ5T6X5 926 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 GDF6Q6KF10 455 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 C8orf82Q6P1X6 216 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 IQCHQ86VS3 1027 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 CHFRQ96EP1 664 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 CENPOQ9BU64 300 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 ZSCAN5AQ9BUG6 496 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 SYNDIG1Q9H7V2 258 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 NFKBIL1Q9UBC1 381 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 S100A9P06702 114 aaKnown RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 HOXD8P13378 290 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 ETFAP13804 333 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 PRKACBP22694 351 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 SOX3P41225 446 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 OMPP47874 163 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 MAZP56270 477 aaKnown RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF648Q5T619 568 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 LINGO2Q7L985 606 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 RANBP3LQ86VV4 465 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 NUDT13Q86X67 352 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 FAM98AQ8NCA5 519 aaKnown RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 UBTD2Q8WUN7 234 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 COL26A1Q96A83 441 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 RAD51AP1Q96B01 352 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 BOCQ9BWV1 1114 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 ACTR6Q9GZN1 396 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 PPIL3Q9H2H8 161 aaKnown RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 ITGA10O75578 1167 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 RLN1P04808 185 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 ZNF30P17039 623 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 AKR1D1P51857 326 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 SNRPD2P62316 118 aaKnown RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 FKBP1BP68106 108 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 FAM189BP81408 668 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 VLDLRP98155 873 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 ANKRD54Q6NXT1 300 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 SLC27A4Q6P1M0 643 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 PHC2Q8IXK0 858 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 GALNT6Q8NCL4 622 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 OSTF1Q92882 214 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 RANGRFQ9HD47 186 aaPredicted RBP12.49□□□□□ -0.41
DNMT1-203ENST00000540357 PGAP2Q9UHJ9 254 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 DLGAP4Q9Y2H0 992 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 N6AMT1Q9Y5N5 214 aa12.49□□□□□ -0.41
DNMT1-203ENST00000540357 COL16A1Q07092 1604 aaPredicted RBP12.48□□□□□ -0.41
DNMT1-203ENST00000540357 CARNS1A5YM72 827 aa12.48□□□□□ -0.41
DNMT1-203ENST00000540357 RNASET2O00584 256 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms