RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 LIMS1P48059 325 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 UGT2B15P54855 530 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 TAP2Q03519 686 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 PDE7AQ13946 482 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 E2F2Q14209 437 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 IRF3Q14653 427 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 PUM1Q14671 1186 aaKnown RBP eCLIP11.87□□□□□ -0.51
NEK6-213ENST00000540326 ZNF630Q2M218 657 aaPredicted RBP11.87□□□□□ -0.51
NEK6-213ENST00000540326 DESI1Q6ICB0 168 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 PNCKQ6P2M8 343 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 TUBA3EQ6PEY2 450 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 TRMT11Q7Z4G4 463 aaKnown RBP11.87□□□□□ -0.51
NEK6-213ENST00000540326 KLHDC8AQ8IYD2 350 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 CACTIN-AS1Q8N1I8 211 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 METTL4Q8N3J2 472 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 SDR16C5Q8N3Y7 309 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 PSD4Q8NDX1 1056 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 MRGPRX3Q96LB0 322 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 VPS35Q96QK1 796 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 KCNS3Q9BQ31 491 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 ACAT2Q9BWD1 397 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 GPBP1L1Q9HC44 474 aaPredicted RBP11.87□□□□□ -0.51
NEK6-213ENST00000540326 C11orf16Q9NQ32 467 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 MIEF1Q9NQG6 463 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 SPHK2Q9NRA0 654 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 ENPP4Q9Y6X5 453 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 UNC80Q8N2C7 3258 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 PLXND1Q9Y4D7 1925 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 FOXE1O00358 373 aaPredicted RBP11.87□□□□□ -0.51
NEK6-213ENST00000540326 SOX14O95416 240 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 IGFBP1P08833 259 aaPredicted RBP11.87□□□□□ -0.51
NEK6-213ENST00000540326 LAG3P18627 525 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 CBLP22681 906 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 HOXD12P35452 270 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 LIMK1P53667 647 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 LIM2P55344 173 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 OLR1P78380 273 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 ZNF45Q02386 682 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 TLE2Q04725 743 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 MYO7AQ13402 2215 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 EIF4HQ15056 248 aaKnown RBP11.87□□□□□ -0.51
NEK6-213ENST00000540326 TEAD2Q15562 447 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 ATAD3BQ5T9A4 648 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 TNFAIP8L2Q6P589 184 aaPredicted RBP11.87□□□□□ -0.51
NEK6-213ENST00000540326 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.87□□□□□ -0.51
NEK6-213ENST00000540326 CCDC80Q76M96 950 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 NLRP8Q86W28 1048 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 LAS2Q8IYD9 372 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 KREMEN2Q8NCW0 462 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 SLAIN1Q8ND83 568 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 WDR36Q8NI36 951 aaKnown RBP11.87□□□□□ -0.51
NEK6-213ENST00000540326 SLC35B4Q969S0 331 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 IL17FQ96PD4 163 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 NRTNQ99748 197 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 EFCAB11Q9BUY7 163 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 ATP11BQ9Y2G3 1177 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 TSC22D4Q9Y3Q8 395 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 HCFC2Q9Y5Z7 792 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 WNT6Q9Y6F9 365 aa11.87□□□□□ -0.51
NEK6-213ENST00000540326 TRBV4-1A0A0J9YWV2 114 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 KPNA3O00505 521 aaPredicted RBP11.86□□□□□ -0.51
NEK6-213ENST00000540326 CTDSP2O14595 271 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 FFAR1O14842 300 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 MED26O95402 600 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 IFNA14P01570 189 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 IFNW1P05000 195 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 ARAFP10398 606 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 NAT1P18440 290 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 MMP12P39900 470 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 NNMTP40261 264 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 HMGA2P52926 109 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 NKX2-5P52952 324 aaPredicted RBP11.86□□□□□ -0.51
NEK6-213ENST00000540326 CRISP1P54107 249 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 PCBP3P57721 371 aaKnown RBP11.86□□□□□ -0.51
NEK6-213ENST00000540326 PRKCDQ05655 676 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 ZNF805Q5CZA5 627 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 DEPDC1Q5TB30 811 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 HIST2H2AA3Q6FI13 130 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 FRMPD2BQ6IN97 320 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 CNKSR3Q6P9H4 555 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 CEACAM20Q6UY09 585 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 UTS2BQ765I0 119 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 DPPA4Q7L190 304 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 VN1R2Q8NFZ6 395 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 SLC5A11Q8WWX8 675 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 ABCG4Q9H172 646 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 CXorf36Q9H7Y0 433 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 RC3H2Q9HBD1 1191 aaKnown RBP11.86□□□□□ -0.51
NEK6-213ENST00000540326 MYNNQ9NPC7 610 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.86□□□□□ -0.51
NEK6-213ENST00000540326 CCDC59Q9P031 241 aaKnown RBP11.86□□□□□ -0.51
NEK6-213ENST00000540326 TAAR2Q9P1P5 351 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 FTSJ1Q9UET6 329 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 PLAGL1Q9UM63 463 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 ANGPT4Q9Y264 503 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 UGT2A1Q9Y4X1 527 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 PCDHGB6Q9Y5F9 930 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 A3GALT2U3KPV4 340 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 PLK4O00444 970 aa11.86□□□□□ -0.51
NEK6-213ENST00000540326 ARHGAP33O14559 1287 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms