RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 NECTIN3Q9NQS3 549 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 TRPM6Q9BX84 2022 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 TRANK1O15050 2925 aa13.05□□□□□ -0.32
BNIP3-202ENST00000540159 TRIM43BA6NCK2 446 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 ADAMDEC1O15204 470 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 SLC16A5O15375 505 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 LILRB3O75022 631 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 FKTNO75072 461 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 PCGF2P35227 344 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 GGT2P36268 569 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 MMP12P39900 470 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 FNDC3BQ53EP0 1204 aaKnown RBP13.04□□□□□ -0.32
BNIP3-202ENST00000540159 CDKL4Q5MAI5 379 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 DEPDC1Q5TB30 811 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 ANXA8L1Q5VT79 327 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 ERAP2Q6P179 960 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 RNF165Q6ZSG1 346 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 PTCHD4Q6ZW05 846 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 RSPO3Q9BXY4 272 aaPredicted RBP13.04□□□□□ -0.32
BNIP3-202ENST00000540159 KCNK12Q9HB15 430 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 CXXC1Q9P0U4 656 aaPredicted RBP13.04□□□□□ -0.32
BNIP3-202ENST00000540159 CLEC2DQ9UHP7 191 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 PSORS1C1Q9UIG5 152 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 MOSPD1Q9UJG1 213 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 SOBPA7XYQ1 873 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 CLCA1A8K7I4 914 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 C1GALT1C1LP0DN25 315 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 IL1RNP18510 177 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 TNNI3P19429 210 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 ACVR2AP27037 513 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 DGKGP49619 791 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 PTPN5P54829 565 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 MANFP55145 182 aaKnown RBP13.04□□□□□ -0.32
BNIP3-202ENST00000540159 LIM2P55344 173 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 ELP6Q0PNE2 266 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF404Q494X3 552 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 PAQR6Q6TCH4 344 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 TECPR1Q7Z6L1 1165 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 GALNT13Q8IUC8 556 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 HORMAD2Q8N7B1 307 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 SLC5A11Q8WWX8 675 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 JPH3Q8WXH2 748 aaPredicted RBP13.04□□□□□ -0.32
BNIP3-202ENST00000540159 TMEM203Q969S6 136 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 MROQ9BYG7 248 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 XKR8Q9H6D3 395 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 ERVK13-1Q9NX77 482 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 TAS2R9Q9NYW1 312 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 TAAR2Q9P1P5 351 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 SLC23A2Q9UGH3 650 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 HEATR5BQ9P2D3 2071 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 CTDSP2O14595 271 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 OR10H3O60404 316 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 TNFRSF21O75509 655 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 KLHL18O94889 574 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 SOD1P00441 154 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 CEBPBP17676 345 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 ST8SIA6P61647 398 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 MICAQ29983 383 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 STEAP3Q658P3 488 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 LILRA6Q6PI73 481 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 TMIGD1Q6UXZ0 262 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.04□□□□□ -0.32
BNIP3-202ENST00000540159 CCDC149Q6ZUS6 474 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 QRSL1Q9H0R6 528 aaKnown RBP13.04□□□□□ -0.32
BNIP3-202ENST00000540159 NMNAT1Q9HAN9 279 aaPredicted RBP13.04□□□□□ -0.32
BNIP3-202ENST00000540159 CCDC177Q9NQR7 707 aaPredicted RBP13.04□□□□□ -0.32
BNIP3-202ENST00000540159 C1GALT1Q9NS00 363 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 ACER3Q9NUN7 267 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 BTNL2Q9UIR0 455 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 PCDHGB1Q9Y5G3 927 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 PCDHGA2Q9Y5H1 932 aa13.04□□□□□ -0.32
BNIP3-202ENST00000540159 C5orf58C9J3I9 102 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 DSCR3O14972 297 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 ARHGEF15O94989 841 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 PCCBP05166 539 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 IMPDH2P12268 514 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 C6P13671 934 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF750Q32MQ0 723 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 PLEKHG7Q6ZR37 379 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 RHOXF1Q8NHV9 184 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 DOK4Q8TEW6 326 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 XAGE5Q8WWM1 108 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 ITFG2Q969R8 447 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 COQ8BQ96D53 544 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 EPYCQ99645 322 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 LGR4Q9BXB1 951 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 TRPC4Q9UBN4 977 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 EIF3FO00303 357 aaPredicted RBP13.03□□□□□ -0.32
BNIP3-202ENST00000540159 RNASET2O00584 256 aaKnown RBP13.03□□□□□ -0.32
BNIP3-202ENST00000540159 PRMT3O60678 531 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 CHMP24386 653 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 RNF144AP50876 292 aaPredicted RBP13.03□□□□□ -0.32
BNIP3-202ENST00000540159 PIN1Q13526 163 aaPredicted RBP13.03□□□□□ -0.32
BNIP3-202ENST00000540159 PUM1Q14671 1186 aaKnown RBP eCLIP13.03□□□□□ -0.327e-7■■■□□ 18.1
BNIP3-202ENST00000540159 DHCR24Q15392 516 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 ZDHHC20Q5W0Z9 365 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 HIST2H2AA3Q6FI13 130 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 CYP4Z2PQ8N1L4 340 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 UBE2J2Q8N2K1 259 aa13.03□□□□□ -0.32
BNIP3-202ENST00000540159 OR9A1PQ8NGU1 263 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms