RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PROSER1Q86XN7 944 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 ZCCHC7Q8N3Z6 543 aaKnown RBP16.06■□□□□ 0.16
COPS3-212ENST00000539941 BAHD1Q8TBE0 780 aaPredicted RBP16.06■□□□□ 0.16
COPS3-212ENST00000539941 TM4SF18Q96CE8 201 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 VPS50Q96JG6 964 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 TRIM8Q9BZR9 551 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 AICDAQ9GZX7 198 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 FAM86C1Q9NVL1 165 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 SUSD2Q9UGT4 822 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 MAGEL2Q9UJ55 1249 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 PILRAQ9UKJ1 303 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 POMT2Q9UKY4 750 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 KNL1Q8NG31 2342 aa16.06■□□□□ 0.16
COPS3-212ENST00000539941 H3BNX3 289 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 ARPC2O15144 300 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 ERI3O43414 337 aaKnown RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 GUCY1B2O75343 617 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 EPN2O95208 641 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 SLC35G6P0C7Q6 338 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 ETS2P15036 469 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 PPIBP23284 216 aaKnown RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 CDKN2CP42773 168 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 CTSKP43235 329 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 PLA2G16P53816 162 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 MRPS22P82650 360 aaKnown RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 GTDC1Q4AE62 458 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 ZNF385BQ569K4 471 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 ANKRD26P1Q6NSI1 321 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 FBXO42Q6P3S6 717 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 IFNEQ86WN2 208 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 DTWD2Q8NBA8 298 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 GOT1L1Q8NHS2 421 aaPredicted RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 GAL3ST3Q96A11 431 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 TM4SF19Q96DZ7 209 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 TEFMQ96QE5 360 aaKnown RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 OR2A5Q96R48 311 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 ZFYVE21Q9BQ24 234 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 C17orf62Q9BQA9 187 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 KAT8Q9H7Z6 458 aaKnown RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 SLC6A13Q9NSD5 602 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 GMPR2Q9P2T1 348 aaKnown RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 VPS13AQ96RL7 3174 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 EVPLLA8MZ36 301 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 PPM1DO15297 605 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 UBXN7O94888 489 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 SCELO95171 688 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 CDK4P11802 303 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 DRD2P14416 443 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 ATP6V1B2P21281 511 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 HIST1H1TP22492 207 aaPredicted RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 DHPSP49366 369 aaPredicted RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 MC1RQ01726 317 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 PDK3Q15120 406 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 C14orf28Q4W4Y0 310 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 RNF44Q7L0R7 432 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 CALHM3Q86XJ0 350 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 C1orf210Q8IVY1 113 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 FAM47BQ8NA70 645 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 CAMKVQ8NCB2 501 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 OR2T12Q8NG77 320 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 RSC1A1Q92681 617 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 ATOH1Q92858 354 aaPredicted RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 ABTB1Q969K4 478 aaPredicted RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 NMD3Q96D46 503 aaKnown RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 ZNF583Q96ND8 569 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 ROGDIQ9GZN7 287 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 ABCG4Q9H172 646 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 IRF2BPLQ9H1B7 796 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 SEMA6CQ9H3T2 930 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 KLHL31Q9H511 634 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 PRDM7Q9NQW5 492 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 C6orf203Q9P0P8 240 aaPredicted RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 ZNF282Q9UDV7 671 aaPredicted RBP16.05■□□□□ 0.16
COPS3-212ENST00000539941 VPS4AQ9UN37 437 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 CORO2BQ9UQ03 480 aa16.05■□□□□ 0.16
COPS3-212ENST00000539941 A0A1B0GVT2 93 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 URADA6NGE7 173 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 FAM220BPB1ANY3 271 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 TMPRSS11DO60235 418 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 CTSVO60911 334 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 CPSF4O95639 269 aaKnown RBP16.04■□□□□ 0.16
COPS3-212ENST00000539941 BAG2O95816 211 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 B3GALT4O96024 378 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 RXRGP48443 463 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 ATXN3P54252 364 aaPredicted RBP16.04■□□□□ 0.16
COPS3-212ENST00000539941 EPHA4P54764 986 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 ABHD18Q0P651 414 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 SLC9A5Q14940 896 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 MTX3Q5HYI7 312 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 MANEAQ5SRI9 462 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 CYP2R1Q6VVX0 501 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 ZNF793Q6ZN11 406 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 ZNF761Q86XN6 746 aaPredicted RBP16.04■□□□□ 0.16
COPS3-212ENST00000539941 TICAM1Q8IUC6 712 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 CLECL1Q8IZS7 167 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 MARVELD2Q8N4S9 558 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 SLC38A3Q99624 504 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 FAIM2Q9BWQ8 316 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 IKZF5Q9H5V7 419 aa16.04■□□□□ 0.16
COPS3-212ENST00000539941 EVA1BQ9NVM1 165 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms