RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 PSME2Q9UL46 239 aa16.31■□□□□ 0.2
LTBR-207ENST00000539925 TRBV23OR9-2A0A075B6M9 112 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 A0A0J9YY10 115 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 ZSCAN9O15535 394 aaPredicted RBP16.3■□□□□ 0.2
LTBR-207ENST00000539925 TNFRSF21O75509 655 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 HPRP00739 348 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 CST1P01037 141 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 NTRK1P04629 796 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 CKMT2P17540 419 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 MAGEA2P43356 314 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 PRIM2P49643 509 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 CHN2P52757 468 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 HHEXQ03014 270 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 MLLT1Q03111 559 aaPredicted RBP16.3■□□□□ 0.2
LTBR-207ENST00000539925 EPS8Q12929 822 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 SLAMF1Q13291 335 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 NRF1Q16656 503 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 NDUFAF5Q5TEU4 345 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 BHLHB9Q6PI77 547 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 ENPP6Q6UWR7 440 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 ZNF551Q7Z340 670 aaPredicted RBP16.3■□□□□ 0.2
LTBR-207ENST00000539925 ZDHHC13Q8IUH4 622 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 NAGSQ8N159 534 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 FAM46DQ8NEK8 389 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 PJA1Q8NG27 643 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 MOAP1Q96BY2 351 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 TM4SF19Q96DZ7 209 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 NEURL3Q96EH8 262 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 VPS50Q96JG6 964 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 ZFYVE21Q9BQ24 234 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.3■□□□□ 0.2
LTBR-207ENST00000539925 CD320Q9NPF0 282 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 SLC35C2Q9NQQ7 365 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 C2orf42Q9NWW7 574 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 PHF11Q9UIL8 331 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 TLR4O00206 839 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 GNGT2O14610 69 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 DPM1O60762 260 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 LYNP07948 512 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 ZNF23P17027 643 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 POLR2CP19387 275 aaPredicted RBP16.3■□□□□ 0.2
LTBR-207ENST00000539925 SOAT1P35610 550 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 CXCL12P48061 93 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 LRRC23Q53EV4 343 aaPredicted RBP16.3■□□□□ 0.2
LTBR-207ENST00000539925 ANGPTL8Q6UXH0 198 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 MAMSTRQ6ZN01 415 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 CCDC80Q76M96 950 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 ABHD13Q7L211 337 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 EPHX4Q8IUS5 362 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 C10orf111Q8N326 155 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 METTL25Q8N6Q8 603 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 OR10G6Q8NH81 332 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 LZICQ8WZA0 190 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 RERGQ96A58 199 aaPredicted RBP16.3■□□□□ 0.2
LTBR-207ENST00000539925 GUCD1Q96NT3 240 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 SLC29A1Q99808 456 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 LRRC61Q9BV99 259 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 TCEAL2Q9H3H9 227 aaPredicted RBP16.3■□□□□ 0.2
LTBR-207ENST00000539925 IL1RAPQ9NPH3 570 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 MS4A12Q9NXJ0 267 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 ANGPT4Q9Y264 503 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 ASB4Q9Y574 426 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 V9GYQ6 96 aa16.3■□□□□ 0.2
LTBR-207ENST00000539925 FAM149AA5PLN7 773 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 SOCS2O14508 198 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 AXIN1O15169 862 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 ACOX3O15254 700 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 NOBOXO60393 691 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 EFNA1P20827 205 aaPredicted RBP16.29■□□□□ 0.2
LTBR-207ENST00000539925 MAGP20916 626 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 MVDP53602 400 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 HNRNPKP61978 463 aaKnown RBP eCLIP16.29■□□□□ 0.29e-7■■■■■ 27.6
LTBR-207ENST00000539925 RPL6Q02878 288 aaKnown RBP16.29■□□□□ 0.2
LTBR-207ENST00000539925 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.29■□□□□ 0.2
LTBR-207ENST00000539925 SAXO2Q658L1 398 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 TMEM64Q6YI46 380 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 BAHD1Q8TBE0 780 aaPredicted RBP16.29■□□□□ 0.2
LTBR-207ENST00000539925 PNPT1Q8TCS8 783 aaKnown RBP16.29■□□□□ 0.2
LTBR-207ENST00000539925 JPH3Q8WXH2 748 aaPredicted RBP16.29■□□□□ 0.2
LTBR-207ENST00000539925 OR2A5Q96R48 311 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 SERINC2Q96SA4 455 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 DPH2Q9BQC3 489 aaPredicted RBP16.29■□□□□ 0.2
LTBR-207ENST00000539925 EPS8L2Q9H6S3 715 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 C1GALT1Q9NS00 363 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 SEMA3GQ9NS98 782 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 HRASLS2Q9NWW9 162 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 TEX10Q9NXF1 929 aaPredicted RBP16.29■□□□□ 0.2
LTBR-207ENST00000539925 PILRAQ9UKJ1 303 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 DOLKQ9UPQ8 538 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 ENTPD4Q9Y227 616 aa16.29■□□□□ 0.2
LTBR-207ENST00000539925 OR5K3A6NET4 321 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 C19orf67A6NJJ6 358 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 MAP3K13O43283 966 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 SUV39H1O43463 412 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 ZNF682O95780 498 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 FASLGP48023 281 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 ARHGDIAP52565 204 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 NHSL2Q5HYW2 709 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 FBXO42Q6P3S6 717 aa16.28■□□□□ 0.2
LTBR-207ENST00000539925 TMEM154Q6P9G4 183 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms