RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 OR10G2Q8NGC3 310 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 OR4C15Q8NGM1 316 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 RHOXF1Q8NHV9 184 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 FOXJ1Q92949 421 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 TAMM41Q96BW9 452 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 ZHX1-C8orf76Q96EF9 292 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 MRGPRX3Q96LB0 322 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 KCNC2Q96PR1 638 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 ALOXE3Q9BYJ1 711 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 GPATCH2Q9NW75 528 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 IL36AQ9UHA7 158 aa13.92□□□□□ -0.18
CDCA3-207ENST00000538862 TICRRQ7Z2Z1 1910 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 F5P12259 2224 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 CLCA1A8K7I4 914 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 TTC34A8MYJ7 566 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 H3BM21 787 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 SH3BGRLO75368 114 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 C1orf105O95561 183 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 CTSLP07711 333 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 HBA1P69905 142 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 CBX3Q13185 183 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 MICAQ29983 383 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 ZNF658BQ4V348 819 aaPredicted RBP13.91□□□□□ -0.18
CDCA3-207ENST00000538862 TMEM236Q5W0B7 351 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 VITQ6UXI7 678 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 TMPRSS11BQ86T26 416 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 DEPDC4Q8N2C3 294 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 DNAJC22Q8N4W6 341 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 SLC5A8Q8N695 610 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 ZNF480Q8WV37 535 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 ELSPBP1Q96BH3 223 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 AP2M1Q96CW1 435 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 EHD1Q9H4M9 534 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 PRM3Q9NNZ6 103 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 C1GALT1Q9NS00 363 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 TRNAU1APQ9NX07 287 aaKnown RBP13.91□□□□□ -0.18
CDCA3-207ENST00000538862 TBC1D14Q9P2M4 693 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 SPASTQ9UBP0 616 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 TESMINQ9Y4I5 508 aa13.91□□□□□ -0.18
CDCA3-207ENST00000538862 PSMD11O00231 422 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 FGF19O95750 216 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 VIPP01282 170 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 IFNA14P01570 189 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 CDK1P06493 297 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 FURINP09958 794 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 C1GALT1C1LP0DN25 315 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 HLA-EP13747 358 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 NPPBP16860 134 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 PDHA2P29803 388 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 MMP12P39900 470 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 VASPP50552 380 aaPredicted RBP13.9□□□□□ -0.18
CDCA3-207ENST00000538862 SCARB2Q14108 478 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 ARHGAP15Q53QZ3 475 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 TRIM40Q6P9F5 258 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 LIPIQ6XZB0 460 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 COMMD6Q7Z4G1 85 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 OXR1Q8N573 874 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 DENND6BQ8NEG7 585 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 MTERF3Q96E29 417 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 DACH2Q96NX9 599 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 PSD2Q9BQI7 771 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 SLC35A5Q9BS91 424 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 SGPP1Q9BX95 441 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 MMP27Q9H306 513 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 MYNNQ9NPC7 610 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 SLC2A4RGQ9NR83 387 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 TDP1Q9NUW8 608 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 TMEM184CQ9NVA4 438 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 DYRK1BQ9Y463 629 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 TMEM247A6NEH6 219 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 HEPACAM2A8MVW5 462 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 STK25O00506 426 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 C6orf47O95873 294 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 ELFN1P0C7U0 828 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 ETFAP13804 333 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 TGM1P22735 817 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 CD40LGP29965 261 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 LIPAP38571 399 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 PRIM2P49643 509 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 PPP5CP53041 499 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 TBPL1P62380 186 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 IFITM3Q01628 133 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 FBXO43Q4G163 708 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 BCL7AQ4VC05 210 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 CRB2Q5IJ48 1285 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 COX20Q5RI15 118 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 PERM1Q5SV97 790 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 HIST2H2AA3Q6FI13 130 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 ERAP2Q6P179 960 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 PAGE2Q7Z2X7 111 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 SYTL1Q8IYJ3 562 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 GGHQ92820 318 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 RPL3LQ92901 407 aaKnown RBP13.9□□□□□ -0.18
CDCA3-207ENST00000538862 PPCDCQ96CD2 204 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 LRRC3BQ96PB8 259 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 DCSTAMPQ9H295 470 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 ARMC7Q9H6L4 198 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 DMRT3Q9NQL9 472 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 WNT16Q9UBV4 365 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 PCDHGA2Q9Y5H1 932 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms