RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 HIST2H2ACQ16777 129 aaPredicted RBP13.99□□□□□ -0.17
RAB40B-202ENST00000538809 TECRLQ5HYJ1 363 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 PAGE2BQ5JRK9 111 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 HIST2H2AA3Q6FI13 130 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 ABHD17CQ6PCB6 329 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 RPS19BP1Q86WX3 136 aaKnown RBP13.99□□□□□ -0.17
RAB40B-202ENST00000538809 LAS2Q8IYD9 372 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 RNF175Q8N4F7 328 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 THAP3Q8WTV1 239 aaPredicted RBP13.99□□□□□ -0.17
RAB40B-202ENST00000538809 DCAKDQ8WVC6 231 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 SCMH1Q96GD3 660 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 SERINC2Q96SA4 455 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 MS4A8Q9BY19 250 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 TSPAN10Q9H1Z9 355 aaPredicted RBP13.99□□□□□ -0.17
RAB40B-202ENST00000538809 SEC14L3Q9UDX4 400 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 ZNF180Q9UJW8 692 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 UNC79Q9P2D8 2635 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 CACNA1CQ13936 2221 aa13.99□□□□□ -0.17
RAB40B-202ENST00000538809 LRRC14BA6NHZ5 514 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 SYCE1LA8MT33 242 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 RTCAO00442 366 aaKnown RBP13.98□□□□□ -0.17
RAB40B-202ENST00000538809 ZG16O60844 167 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 NEURL1O76050 574 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 STSP08842 583 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 CD46P15529 392 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 EEF1DP29692 281 aaKnown RBP13.98□□□□□ -0.17
RAB40B-202ENST00000538809 HPDP32754 393 aaPredicted RBP13.98□□□□□ -0.17
RAB40B-202ENST00000538809 SERPINB9P50453 376 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 MTTPP55157 894 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 PER3P56645 1201 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 MLF1P58340 268 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 DDX39BQ13838 428 aaKnown RBP13.98□□□□□ -0.17
RAB40B-202ENST00000538809 PCBP2Q15366 365 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■■■■■ 46.1
RAB40B-202ENST00000538809 CRYBG3Q68DQ2 2970 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 ZNF787Q6DD87 383 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 ZNF793Q6ZN11 406 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 GALNTL5Q7Z4T8 443 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 UBE3DQ7Z6J8 389 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 LGI4Q8N135 537 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 TEX9Q8N6V9 391 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 APCDD1LQ8NCL9 501 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 DNAJB8Q8NHS0 232 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 ADAMTS18Q8TE60 1221 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 ZNF473Q8WTR7 871 aaKnown RBP13.98□□□□□ -0.17
RAB40B-202ENST00000538809 SREK1Q8WXA9 508 aaKnown RBP13.98□□□□□ -0.17
RAB40B-202ENST00000538809 DEFB126Q9BYW3 111 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 PRDM7Q9NQW5 492 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 ZNF358Q9NW07 568 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 LRFN1Q9P244 771 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 SH3BGRL2Q9UJC5 107 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 NFU1Q9UMS0 254 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 DAPP1Q9UN19 280 aa13.98□□□□□ -0.17
RAB40B-202ENST00000538809 MRPS33Q9Y291 106 aaKnown RBP13.98□□□□□ -0.17
RAB40B-202ENST00000538809 ZNF407Q9C0G0 2248 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 SAP18O00422 153 aaKnown RBP13.97□□□□□ -0.17
RAB40B-202ENST00000538809 CYR61O00622 381 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 TGFB1P01137 390 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 INHBAP08476 426 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 ABHD2P08910 425 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 GFAPP14136 432 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 GCAP28676 217 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 ALDH18A1P54886 795 aaKnown RBP13.97□□□□□ -0.17
RAB40B-202ENST00000538809 HSD17B7P56937 341 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 TGM3Q08188 693 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 GRHL2Q6ISB3 625 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 MED27Q6P2C8 311 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 MYLK4Q86YV6 388 aaPredicted RBP13.97□□□□□ -0.17
RAB40B-202ENST00000538809 TMEM178AQ8NBL3 297 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 LRRN4CLQ8ND94 238 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 B3GNT7Q8NFL0 401 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 NCLNQ969V3 563 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 FRMD6Q96NE9 622 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 KCNC2Q96PR1 638 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 MAPKAP1Q9BPZ7 522 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 TXLNGYQ9BZA5 131 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 VPS11Q9H270 941 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 CPSF2Q9P2I0 782 aaKnown RBP13.97□□□□□ -0.17
RAB40B-202ENST00000538809 ZNF223Q9UK11 482 aaPredicted RBP13.97□□□□□ -0.17
RAB40B-202ENST00000538809 FBXW2Q9UKT8 454 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 TSC22D4Q9Y3Q8 395 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 PCDHGB6Q9Y5F9 930 aa13.97□□□□□ -0.17
RAB40B-202ENST00000538809 DNAJC13O75165 2243 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 EXPH5Q8NEV8 1989 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 A0A087WUV0 522 aaPredicted RBP13.96□□□□□ -0.17
RAB40B-202ENST00000538809 TRGV8A0A0C4DH27 118 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 CLDN4O14493 209 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 FCHO1O14526 889 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 PRKNO60260 465 aaPredicted RBP13.96□□□□□ -0.17
RAB40B-202ENST00000538809 SLC25A12O75746 678 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 SCELO95171 688 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 SP1P08047 785 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 EPB42P16452 691 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 SSR2P43308 183 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 CLCN2P51788 898 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 ID2Q02363 134 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 MAPKAPK3Q16644 382 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 PFKFB4Q16877 469 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 SLC25A25Q6KCM7 469 aa13.96□□□□□ -0.17
RAB40B-202ENST00000538809 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.96□□□□□ -0.17
RAB40B-202ENST00000538809 ZNF227Q86WZ6 799 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms