RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 CACNA2D3Q8IZS8 1091 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 SLC38A9Q8NBW4 561 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 PROKR1Q8TCW9 393 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 UBTD2Q8WUN7 234 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 NEIL2Q969S2 332 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 FBXW5Q969U6 566 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 RERGQ96A58 199 aaPredicted RBP5.65□□□□□ -1.5
DDB1-210ENST00000538129 CLIP3Q96DZ5 547 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 TM4SF19Q96DZ7 209 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 WDR34Q96EX3 536 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 SCYL1Q96KG9 808 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 KCNJ15Q99712 375 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 C17orf62Q9BQA9 187 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 AIF1LQ9BQI0 150 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 EFHD1Q9BUP0 239 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 GPR87Q9BY21 358 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 NLNQ9BYT8 704 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 SLC7A5P2Q9GIP4 190 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 PITHD1Q9GZP4 211 aaPredicted RBP5.65□□□□□ -1.5
DDB1-210ENST00000538129 MRPL46Q9H2W6 279 aaKnown RBP5.65□□□□□ -1.5
DDB1-210ENST00000538129 EHD1Q9H4M9 534 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 NT5DC2Q9H857 520 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 ACTR5Q9H9F9 607 aaPredicted RBP5.65□□□□□ -1.5
DDB1-210ENST00000538129 PELI2Q9HAT8 420 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 LHX9Q9NQ69 397 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 DNAJC11Q9NVH1 559 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 WWOXQ9NZC7 414 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 FBLN5Q9UBX5 448 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 SRPK3Q9UPE1 567 aa5.65□□□□□ -1.5
DDB1-210ENST00000538129 SCN3AQ9NY46 2000 aa5.65□□□□□ -1.51
DDB1-210ENST00000538129 FER1L5A0AVI2 2057 aa5.65□□□□□ -1.51
DDB1-210ENST00000538129 LOC105369274A0A096LPK9 316 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 LOC102723532A0A0G2JNH3 316 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 TRBC2A0A5B9 178 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 SUPT3HB4E1H0 165 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 C21orf140B9A014 251 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 STX16-NPEPL1H3BU86 382 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 GOLGA8RI6L899 631 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 K7EPI3 171 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 STX16O14662 325 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 HAT1O14929 419 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 CLGNO14967 610 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 CTIFO43310 598 aaKnown RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 OR1F1O43749 312 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 LCMT2O60294 686 aaKnown RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 SUPT3HO75486 399 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 WDR47O94967 919 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 EIF2S1P05198 315 aaKnown RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 PIM1P11309 404 aaPredicted RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 CDH1P12830 882 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 GFAPP14136 432 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 KRT4P19013 534 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 TAC1P20366 129 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 GSTM2P28161 218 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 RORAP35398 523 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 AHRP35869 848 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 STAT5AP42229 794 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 PIK3CGP48736 1102 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 HSPA7P48741 367 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 DCDP81605 110 aaKnown RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 TLE3Q04726 772 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 SLC18A2Q05940 514 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 FAPQ12884 760 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 CDC16Q13042 620 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 FAM53BQ14153 422 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 E2F2Q14209 437 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 TGIF1Q15583 401 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 HIST2H2ACQ16777 129 aaPredicted RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 ST3GAL2Q16842 350 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 PFKFB4Q16877 469 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 PRTGQ2VWP7 1150 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 C18orf21Q32NC0 220 aaPredicted RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 TECRLQ5HYJ1 363 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 CATSPEREQ5SY80 951 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 BEND6Q5SZJ8 279 aaPredicted RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 PRAMEF17Q5VTA0 474 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 ATG9BQ674R7 924 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 HIST2H2AA3Q6FI13 130 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 FRMPD2BQ6IN97 320 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 RHBDD2Q6NTF9 364 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 PRMT9Q6P2P2 845 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 LRRC70Q7Z2Q7 622 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 DSELQ8IZU8 1212 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 OR4N4Q8N0Y3 316 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 KRT78Q8N1N4 520 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 CSNK1A1LQ8N752 337 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 TTC29Q8NA56 475 aaPredicted RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 MFSD9Q8NBP5 474 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 CAMKVQ8NCB2 501 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 SLC13A3Q8WWT9 602 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 MR1Q95460 341 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 ESAMQ96AP7 390 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 KIAA1143Q96AT1 154 aaPredicted RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 DACT3Q96B18 629 aaPredicted RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 NAF1Q96HR8 494 aaKnown RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 CCNL2Q96S94 520 aaPredicted RBP5.64□□□□□ -1.51
DDB1-210ENST00000538129 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 TMEM79Q9BSE2 394 aa5.64□□□□□ -1.51
DDB1-210ENST00000538129 JAM3Q9BX67 310 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms