RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 HS6ST1O60243 411 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 KLK8O60259 260 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 HCN1O60741 890 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 MYO1DO94832 1006 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 SNRPB2P08579 225 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 HNRNPH1P31943 449 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 RAB8AP61006 207 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 OLR1P78380 273 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 GXYLT1Q4G148 440 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 XKR6Q5GH73 641 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 ABHD17CQ6PCB6 329 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 VN1R5Q7Z5H4 357 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 SLC22A16Q86VW1 577 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 DND1Q8IYX4 353 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 TCAIMQ8N3R3 496 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 SRFBP1Q8NEF9 429 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 MYRIPQ8NFW9 859 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 OR2M7Q8NG81 312 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 OR52N2Q8NGI0 321 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 OR14A16Q8NHC5 309 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 NUBPLQ8TB37 319 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 DAZLQ92904 295 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 MS4A14Q96JA4 679 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 PDLIM2Q96JY6 352 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 FOXC2Q99958 501 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 TMUB1Q9BVT8 246 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 RBCK1Q9BYM8 510 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 ROGDIQ9GZN7 287 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 IL1RL2Q9HB29 575 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 QPCTLQ9NXS2 382 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 DYRK1BQ9Y463 629 aa10.41□□□□□ -0.74
CLSTN3-206ENST00000535668 HRNRQ86YZ3 2850 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 PABPN1LA6NDY0 278 aaKnown RBP10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 USP27XA6NNY8 438 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 PRKNO60260 465 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 WDR1O75083 606 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 KRT38O76015 456 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 B3GALT4O96024 378 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 IGKV3-11P04433 115 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 TPOP07202 933 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 CNR1P21554 472 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 ACVR2AP27037 513 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 LIM2P55344 173 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 SERTAD2Q14140 314 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 SLC25A35Q3KQZ1 300 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 FBXL19-AS1Q494R0 122 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 HSDL2Q6YN16 418 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 RTL4Q6ZR62 310 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 GK5Q6ZS86 529 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 NCCRP1Q6ZVX7 275 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 KRT78Q8N1N4 520 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 FAM109AQ8N4B1 249 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 SLC15A4Q8N697 577 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 TMEM52Q8NDY8 209 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 OR5L2Q8NGL0 311 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 NCLNQ969V3 563 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 NTNG2Q96CW9 530 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 RASL10BQ96S79 203 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 OSBPL9Q96SU4 736 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 FAM173AQ9BQD7 235 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 CCDC77Q9BR77 488 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 TTYH2Q9BSA4 534 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 DERL2Q9GZP9 239 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 ACKR4Q9NPB9 350 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 PRDM7Q9NQW5 492 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 PRTFDC1Q9NRG1 225 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 NSMCE4AQ9NXX6 385 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 ZNF490Q9ULM2 529 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 FAM215AQ9Y5M1 114 aa10.4□□□□□ -0.74
CLSTN3-206ENST00000535668 CCDC189A1A4V9 331 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 ANKRD33BA6NCL7 494 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 FIGNL2A6NMB9 653 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 A8MVJ9 347 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 ACOT7O00154 380 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 CDC7O00311 574 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 B3GALT2O43825 422 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 PRAMEF4O60810 478 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 H2AFYO75367 372 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 OR2J2O76002 312 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 GOSR1O95249 250 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 GUCA1CO95843 209 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 SERPINB1P30740 379 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 KCNC1P48547 511 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 HNRNPFP52597 415 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 HK2P52789 917 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 MTTPP55157 894 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 PPIAP62937 165 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 BTN3A2P78410 334 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 TGFBIQ15582 683 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 PRAMEF9Q5VWM5 478 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 CES4AQ5XG92 561 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 RTL6Q6ICC9 239 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 TRMT10BQ6PF06 316 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 ADGRD1Q6QNK2 874 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 OPN5Q6U736 354 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 C3P1Q6ZMU1 363 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 TRILQ7L0X0 811 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 TMPRSS11BQ86T26 416 aa10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.39□□□□□ -0.75
CLSTN3-206ENST00000535668 CLYBLQ8N0X4 340 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms