RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 RIBC2Q9H4K1 309 aa6.33□□□□□ -1.4
USP28-202ENST00000535607 WDCPQ9H6R7 721 aa6.33□□□□□ -1.4
USP28-202ENST00000535607 SMURF2Q9HAU4 748 aa6.33□□□□□ -1.4
USP28-202ENST00000535607 FBRSL1Q9HCM7 1045 aaKnown RBP6.33□□□□□ -1.4
USP28-202ENST00000535607 HEBP1Q9NRV9 189 aa6.33□□□□□ -1.4
USP28-202ENST00000535607 IL37Q9NZH6 218 aa6.33□□□□□ -1.4
USP28-202ENST00000535607 MPP6Q9NZW5 540 aa6.33□□□□□ -1.4
USP28-202ENST00000535607 TEKT2Q9UIF3 430 aa6.33□□□□□ -1.4
USP28-202ENST00000535607 TRMT6Q9UJA5 497 aaKnown RBP6.33□□□□□ -1.4
USP28-202ENST00000535607 ITM2BQ9Y287 266 aa6.33□□□□□ -1.4
USP28-202ENST00000535607 MFHAS1Q9Y4C4 1052 aa6.33□□□□□ -1.4
USP28-202ENST00000535607 V9GYQ6 96 aa6.33□□□□□ -1.4
USP28-202ENST00000535607 MYO18AQ92614 2054 aaKnown RBP6.33□□□□□ -1.4
USP28-202ENST00000535607 LOC105371267A0A1B0GV96 52 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 OTOL1A6NHN0 477 aaPredicted RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 H3BMM5 538 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 SLC28A1O00337 649 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 UBFD1O14562 309 aaKnown RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 BET1O15155 118 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 PROM1O43490 865 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 RGS14O43566 566 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 TSPAN1O60635 241 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 DPM1O60762 260 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 ERN1O75460 977 aaKnown RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 CCNDBP1O95273 360 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 PGLSO95336 258 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 MT-ND2P03891 347 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 EDN1P05305 212 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 CAPN1P07384 714 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 SLC2A3P11169 496 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 UBL4AP11441 157 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 OGNP20774 298 aaKnown RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 C4BPBP20851 252 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 CYP2A7P20853 494 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 FPR1P21462 350 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 FDXRP22570 491 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 IL32P24001 234 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 PIK3CBP42338 1070 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 RENBPP51606 427 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 NKX2-5P52952 324 aaPredicted RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 OR4D2P58180 307 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 MGAT3Q09327 533 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 ABRQ12979 859 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 SEMA3BQ13214 749 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 GPR50Q13585 617 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 MAD2L1BPQ15013 274 aaPredicted RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 MAPKAPK3Q16644 382 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 PFKFB4Q16877 469 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 GPAT3Q53EU6 434 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 YIF1BQ5BJH7 314 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 CEP78Q5JTW2 689 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 FAM122CQ6P4D5 195 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 ERICH5Q6P6B1 374 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 SLC27A1Q6PCB7 646 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 GPRIN3Q6ZVF9 776 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 BNIPLQ7Z465 357 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 GPR149Q86SP6 731 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 RNF130Q86XS8 419 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 GRAMD2AQ8IUY3 354 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 TCAIMQ8N3R3 496 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 TMEM132CQ8N3T6 1108 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 RYBPQ8N488 228 aaPredicted RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 SPATA6LQ8N4H0 392 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 C1orf52Q8N6N3 182 aaKnown RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 LSMEM1Q8N8F7 131 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 GPR150Q8NGU9 434 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 OR10T2Q8NGX3 314 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 FBXO30Q8TB52 745 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 ZFAND1Q8TCF1 268 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 DNAJA4Q8WW22 397 aaPredicted RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 AP3S1Q92572 193 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 RPL3LQ92901 407 aaKnown RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 KIAA1191Q96A73 305 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 KIAA1143Q96AT1 154 aaPredicted RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 ISG20Q96AZ6 181 aaKnown RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 C18orf25Q96B23 403 aaPredicted RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 AP2M1Q96CW1 435 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 FAM120BQ96EK7 910 aaKnown RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 PYURFQ96I23 114 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 C3orf30Q96M34 536 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 GNRHR2Q96P88 292 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 VPS35Q96QK1 796 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 VRK1Q99986 396 aaPredicted RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 CLSTN3Q9BQT9 956 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 C1QTNF3Q9BXJ4 246 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 ZNF717Q9BY31 904 aaPredicted RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 DUSP16Q9BY84 665 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 B3GNT5Q9BYG0 378 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 DERL2Q9GZP9 239 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 C11orf49Q9H6J7 331 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 REEP1Q9H902 201 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 ARNT2Q9HBZ2 717 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 SARS2Q9NP81 518 aaKnown RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 SLC52A3Q9NQ40 469 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 ZC4H2Q9NQZ6 224 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 KRT84Q9NSB2 600 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 DCAF13Q9NV06 445 aaKnown RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 ADPRHL2Q9NX46 363 aa6.32□□□□□ -1.4
USP28-202ENST00000535607 PAQR5Q9NXK6 330 aaPredicted RBP6.32□□□□□ -1.4
USP28-202ENST00000535607 B3GNT2Q9NY97 397 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms