RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 SNX11Q9Y5W9 270 aa22.58■■□□□ 1.21
PTPMT1-205ENST00000534775 RHPN2P1A8MT19 583 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 H0YGG7 62 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 CERS1P27544 350 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 ARF3P61204 181 aaPredicted RBP22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 PPP1CAP62136 330 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 SLC14A1Q13336 389 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 C6orf132Q5T0Z8 1188 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 CPZQ66K79 652 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 ZNF438Q7Z4V0 828 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 C19orf47Q8N9M1 422 aaKnown RBP22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 ZBED6CLQ96FA7 236 aaPredicted RBP22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 ELF4Q99607 663 aaPredicted RBP22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 PKP2Q99959 881 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 SLC35A5Q9BS91 424 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 NEUROD4Q9HD90 331 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 ACSS1Q9NUB1 689 aaPredicted RBP22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 CACNA1IQ9P0X4 2223 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 FRKP42685 505 aaPredicted RBP22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 RXRGP48443 463 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 MANFP55145 182 aaKnown RBP22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 FRMPD2BQ6IN97 320 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 IRGCQ6NXR0 463 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 LILRA2Q8N149 483 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 CATSPER1Q8NEC5 780 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 NCLNQ969V3 563 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 FAM162AQ96A26 154 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 EXOSC8Q96B26 276 aaKnown RBP22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 TRAPPC9Q96Q05 1148 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 SERINC2Q96SA4 455 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 CCDC3Q9BQI4 270 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 KLHL4Q9C0H6 718 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 C1GALT1Q9NS00 363 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 LRRC42Q9Y546 428 aa22.57■■□□□ 1.2
PTPMT1-205ENST00000534775 TMEM131Q92545 1883 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 LOC105369274A0A096LPK9 316 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 LOC102723532A0A0G2JNH3 316 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 P2RX6O15547 441 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 PEX1O43933 1283 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 KRT75O95678 551 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 RETP07949 1114 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 SMIM10L1P0DMW3 83 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 FCGR1AP12314 374 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 ST6GAL1P15907 406 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 UQCRC2P22695 453 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 PCBP4P57723 403 aaKnown RBP22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 ZC3H12BQ5HYM0 836 aaKnown RBP22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 WLSQ5T9L3 541 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 OGFRL1Q5TC84 451 aaPredicted RBP22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 ZCCHC8Q6NZY4 707 aaKnown RBP22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 OR4N4Q8N0Y3 316 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 C10orf111Q8N326 155 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 ARL10Q8N8L6 244 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 DNAJC9Q8WXX5 260 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 PPWD1Q96BP3 646 aaKnown RBP22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 SMIM10Q96HG1 83 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 PILRBQ9UKJ0 227 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 FBXW2Q9UKT8 454 aa22.56■■□□□ 1.2
PTPMT1-205ENST00000534775 CREG1O75629 220 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 SOAT1P35610 550 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 CHI3L1P36222 383 aaPredicted RBP22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 PPM1FP49593 454 aaPredicted RBP22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 SRSF5Q13243 272 aaKnown RBP22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 MLC1Q15049 377 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 RGNQ15493 299 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 VMACQ2NL98 169 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 PLK5Q496M5 336 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 LPCAT4Q643R3 524 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 MAML2Q8IZL2 1156 aaPredicted RBP22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 TMEM102Q8N9M5 508 aaPredicted RBP22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 PAPD5Q8NDF8 572 aaKnown RBP22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 ZFP28Q8NHY6 868 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 PNPT1Q8TCS8 783 aaKnown RBP22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 UGT2B28Q9BY64 529 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 RAB33BQ9H082 229 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 PHF11Q9UIL8 331 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 UTS2RQ9UKP6 389 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 ATG4BQ9Y4P1 393 aa22.55■■□□□ 1.2
PTPMT1-205ENST00000534775 A0A1W2PR48 441 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 TMEM221A6NGB7 291 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 M0R296 226 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 KCNK5O95279 499 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 EIF2S1P05198 315 aaKnown RBP22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 HOXB6P17509 224 aaKnown RBP22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 PEX2P28328 305 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 NTSP30990 170 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 FADDQ13158 208 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 ERMP1Q7Z2K6 904 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 ZNF551Q7Z340 670 aaPredicted RBP22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 ZZZ3Q8IYH5 903 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 CSNK1A1LQ8N752 337 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 ADCY4Q8NFM4 1077 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 OR52N2Q8NGI0 321 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 ZCCHC10Q8TBK6 192 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 LRTOMTQ8WZ04 291 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 TCTN2Q96GX1 697 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 EPB41L1Q9H4G0 881 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 IL21RQ9HBE5 538 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 SLC35C2Q9NQQ7 365 aa22.54■■□□□ 1.2
PTPMT1-205ENST00000534775 LRIT1Q9P2V4 623 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms