RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 PCOLCEQ15113 449 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 TUBB8Q3ZCM7 444 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 COLEC12Q5KU26 742 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 DCAF10Q5QP82 559 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 C18orf63Q68DL7 685 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 OR4C11Q6IEV9 310 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 CHSY3Q70JA7 882 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 CUZD1Q86UP6 607 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 MMP21Q8N119 569 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 METTL6Q8TCB7 284 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 APOBEC4Q8WW27 367 aaKnown RBP13.19□□□□□ -0.3
VPS11-205ENST00000534551 OR1F2PQ96R84 312 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 UBL7Q96S82 380 aaPredicted RBP13.19□□□□□ -0.3
VPS11-205ENST00000534551 SERPINI1Q99574 410 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 ARHGAP9Q9BRR9 750 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 ZNF395Q9H8N7 513 aaPredicted RBP13.19□□□□□ -0.3
VPS11-205ENST00000534551 ZNF160Q9HCG1 818 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 SSU72Q9NP77 194 aaKnown RBP13.19□□□□□ -0.3
VPS11-205ENST00000534551 NECTIN3Q9NQS3 549 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 ARGLU1Q9NWB6 273 aaPredicted RBP13.19□□□□□ -0.3
VPS11-205ENST00000534551 KCMF1Q9P0J7 381 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 ADGRE2Q9UHX3 823 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 SNX6Q9UNH7 406 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 CLDN16Q9Y5I7 305 aa13.19□□□□□ -0.3
VPS11-205ENST00000534551 A0A088AWK7 358 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 IGHV1-45A0A0A0MS14 117 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 GOLGA6L10A6NI86 522 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 CYR61O00622 381 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 PEX12O00623 359 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 ITM2AO43736 263 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 CRCPO75575 148 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 SEMA3DO95025 777 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 ENO1P06733 434 aaKnown RBP13.18□□□□□ -0.3
VPS11-205ENST00000534551 DHRS4L1P0CG22 281 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 ZNF10P21506 573 aaPredicted RBP13.18□□□□□ -0.3
VPS11-205ENST00000534551 BGNP21810 368 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 CCL11P51671 97 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 WDR4P57081 412 aaKnown RBP13.18□□□□□ -0.3
VPS11-205ENST00000534551 TBL3Q12788 808 aaKnown RBP13.18□□□□□ -0.3
VPS11-205ENST00000534551 SLAMF1Q13291 335 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 KCNAB2Q13303 367 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 CUL3Q13618 768 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 RCN2Q14257 317 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 CHI3L2Q15782 390 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 AP5B1Q2VPB7 878 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 ARL13AQ5H913 290 aaPredicted RBP13.18□□□□□ -0.3
VPS11-205ENST00000534551 TMEM205Q6UW68 189 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 ANKRD37Q7Z713 158 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 CROCCP2Q86T23 111 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 APLFQ8IW19 511 aaPredicted RBP13.18□□□□□ -0.3
VPS11-205ENST00000534551 FDCSPQ8NFU4 85 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 RGMAQ96B86 450 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 PAIP2Q9BPZ3 127 aaKnown RBP13.18□□□□□ -0.3
VPS11-205ENST00000534551 WDR77Q9BQA1 342 aaPredicted RBP13.18□□□□□ -0.3
VPS11-205ENST00000534551 TBCDQ9BTW9 1192 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 TEX10Q9NXF1 929 aaPredicted RBP13.18□□□□□ -0.3
VPS11-205ENST00000534551 STK38LQ9Y2H1 464 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 ACTL7BQ9Y614 415 aa13.18□□□□□ -0.3
VPS11-205ENST00000534551 LOC102723996A0A087X1L8 192 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 IGKV3D-11A0A0A0MRZ8 115 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 WASHC1A8K0Z3 465 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 A8MUA0 341 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 ATXN7O15265 892 aaPredicted RBP13.17□□□□□ -0.3
VPS11-205ENST00000534551 TM9SF1O15321 606 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 KALRNO60229 2985 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 NPHS1O60500 1241 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 LDB3O75112 727 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 ZWINTO95229 277 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 AIFM1O95831 613 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 IGHEP01854 428 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 KRT6AP02538 564 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 KRT6BP04259 564 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 KLK1P06870 262 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 JAK1P23458 1154 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 PTX3P26022 381 aaPredicted RBP13.17□□□□□ -0.3
VPS11-205ENST00000534551 TPP2P29144 1249 aaPredicted RBP13.17□□□□□ -0.3
VPS11-205ENST00000534551 HPDP32754 393 aaPredicted RBP13.17□□□□□ -0.3
VPS11-205ENST00000534551 KRT6CP48668 564 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 TNFRSF17Q02223 184 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 SOWAHCQ53LP3 525 aaPredicted RBP13.17□□□□□ -0.3
VPS11-205ENST00000534551 NIPAL1Q6NVV3 410 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 QSOX2Q6ZRP7 698 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 COMMD6Q7Z4G1 85 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 NUDT13Q86X67 352 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 SCUBE1Q8IWY4 988 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 PARP9Q8IXQ6 854 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 C1orf52Q8N6N3 182 aaKnown RBP13.17□□□□□ -0.3
VPS11-205ENST00000534551 OR6Y1Q8NGX8 325 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 APIPQ96GX9 242 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 MAGEB10Q96LZ2 347 aaPredicted RBP13.17□□□□□ -0.3
VPS11-205ENST00000534551 PTCHD1Q96NR3 888 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 CENPKQ9BS16 269 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 NUDT9Q9BW91 350 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 NPLQ9BXD5 320 aaPredicted RBP13.17□□□□□ -0.3
VPS11-205ENST00000534551 EBPLQ9BY08 206 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 C20orf27Q9GZN8 174 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 ZNF71Q9NQZ8 489 aaPredicted RBP13.17□□□□□ -0.3
VPS11-205ENST00000534551 PRTFDC1Q9NRG1 225 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 ZNF446Q9NWS9 450 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 PPT2Q9UMR5 302 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms