RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ZNF835Q9Y2P0 537 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 CLDN16Q9Y5I7 305 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 KLF2Q9Y5W3 355 aaPredicted RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 MYOCOSA0A1B0GUC4 107 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 KLRC4-KLRK1H3BQV0 150 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ZNHIT1O43257 154 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ITGA10O75578 1167 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ZFAND5O76080 213 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 IFNA16P05015 189 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 SLC35E2BP0CK96 405 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ABOP16442 354 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ZNF24P17028 368 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 EPORP19235 508 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 TFEBP19484 476 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 GRNP28799 593 aaKnown RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 CRABP2P29373 138 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 CASP2P42575 452 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 MSH2P43246 934 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 SMSP52788 366 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 DLG1Q12959 904 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 BMPR2Q13873 1038 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 EFTUD2Q15029 972 aaKnown RBP eCLIP8.31□□□□□ -1.081e-8■■■■□ 22.8
COPB1-211ENST00000534234 TBCCQ15814 346 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 RPTNQ6XPR3 784 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 SYT10Q6XYQ8 523 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 Q6ZPB1 254 aaPredicted RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 CMC1Q7Z7K0 106 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 TBC1D1Q86TI0 1168 aaPredicted RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 TICAM1Q8IUC6 712 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 SRRM1Q8IYB3 904 aaKnown RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 GHDCQ8N2G8 530 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 TMEM132CQ8N3T6 1108 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 SRFBP1Q8NEF9 429 aaKnown RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 FBF1Q8TES7 1133 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 NCLNQ969V3 563 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 KCNC2Q96PR1 638 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 CCDC77Q9BR77 488 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 TBCDQ9BTW9 1192 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ALOXE3Q9BYJ1 711 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 PHACTR1Q9C0D0 580 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ADAP2Q9NPF8 381 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 KCMF1Q9P0J7 381 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ZNF223Q9UK11 482 aaPredicted RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 KLF13Q9Y2Y9 288 aaPredicted RBP8.31□□□□□ -1.08
COPB1-211ENST00000534234 ACOT9Q9Y305 439 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 ASB1Q9Y576 335 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 CLCA3PQ9Y6N3 262 aa8.31□□□□□ -1.08
COPB1-211ENST00000534234 CENPEQ02224 2701 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 SUPT3HB4E1H0 165 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 RTCAO00442 366 aaKnown RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 PEX1O43933 1283 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 SH3BGRLO75368 114 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 SUPT3HO75486 399 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 TGFB1P01137 390 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 LTA4HP09960 611 aaKnown RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 PRF1P14222 555 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 TNNI3P19429 210 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 HTR1EP28566 365 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 STX2P32856 288 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 MEOX1P50221 254 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 ADORA2A-AS1P86434 159 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 HSF1Q00613 529 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 STX4Q12846 297 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 NAA30Q147X3 362 aaPredicted RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 SLMAPQ14BN4 828 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 ELAVL1Q15717 326 aaKnown RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 ZNF630Q2M218 657 aaPredicted RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 AP5B1Q2VPB7 878 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 ZDHHC24Q6UX98 284 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 BNC2Q6ZN30 1099 aaPredicted RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 C16orf47Q6ZP98 133 aaPredicted RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 CHSY3Q70JA7 882 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 LRRC70Q7Z2Q7 622 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 MDGA2Q7Z553 956 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 UBE3DQ7Z6J8 389 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 SULF2Q8IWU5 870 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 CYP4Z2PQ8N1L4 340 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 C17orf53Q8N3J3 647 aaPredicted RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 ACOT4Q8N9L9 421 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 POGLUT1Q8NBL1 392 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 ZNF473Q8WTR7 871 aaKnown RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 PTPMT1Q8WUK0 201 aaPredicted RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 DAZLQ92904 295 aaKnown RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 UBE2E3Q969T4 207 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 NXNL1Q96CM4 212 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 MRRFQ96E11 262 aaKnown RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 ATOH8Q96SQ7 321 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 CSF3RQ99062 836 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 MAPKAP1Q9BPZ7 522 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 MS4A8Q9BY19 250 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 ROGDIQ9GZN7 287 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 LIN28AQ9H9Z2 209 aaKnown RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 CHST11Q9NPF2 352 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 IGSF5Q9NSI5 407 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 NUDT4Q9NZJ9 180 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 OPTCQ9UBM4 332 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 VTI1BQ9UEU0 232 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 ERVK-11Q9UQG0 969 aa8.3□□□□□ -1.08
COPB1-211ENST00000534234 YARS2Q9Y2Z4 477 aaKnown RBP8.3□□□□□ -1.08
COPB1-211ENST00000534234 MEMO1Q9Y316 297 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms