RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 C8orf89P0DMQ9 161 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 COX6A1P12074 109 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 HSD3B1P14060 373 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 ACPPP15309 386 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 CHN1P15882 459 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 JAK1P23458 1154 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 HSD3B2P26439 372 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 ARRB2P32121 409 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 HNRNPFP52597 415 aaKnown RBP11.28□□□□□ -0.6
SSBP3-214ENST00000533209 POLE2P56282 527 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 BTG2P78543 158 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 EEF1A2Q05639 463 aaKnown RBP11.28□□□□□ -0.6
SSBP3-214ENST00000533209 ZNF33BQ06732 778 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 CSTF3Q12996 717 aaKnown RBP11.28□□□□□ -0.6
SSBP3-214ENST00000533209 SLAMF1Q13291 335 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 RCN2Q14257 317 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 ABRAXAS2Q15018 415 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 ARL13AQ5H913 290 aaPredicted RBP11.28□□□□□ -0.6
SSBP3-214ENST00000533209 CES4AQ5XG92 561 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 MRM1Q6IN84 353 aaKnown RBP11.28□□□□□ -0.6
SSBP3-214ENST00000533209 QSOX2Q6ZRP7 698 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 LANCL3Q6ZV70 420 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 ANKRD37Q7Z713 158 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 CUZD1Q86UP6 607 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 METTL4Q8N3J2 472 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 ZCCHC7Q8N3Z6 543 aaKnown RBP11.28□□□□□ -0.6
SSBP3-214ENST00000533209 ANKRD42Q8N9B4 389 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 EXD3Q8N9H8 876 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 ADAMTS18Q8TE60 1221 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 TSLPQ969D9 159 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 WBP1Q96G27 269 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 UBL7Q96S82 380 aaPredicted RBP11.28□□□□□ -0.6
SSBP3-214ENST00000533209 CSF3RQ99062 836 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 SH3GL2Q99962 352 aa11.28□□□□□ -0.6
SSBP3-214ENST00000533209 MRPL1Q9BYD6 325 aaKnown RBP11.28□□□□□ -0.6
SSBP3-214ENST00000533209 FAM208BQ5VWN6 2430 aa11.27□□□□□ -0.6
SSBP3-214ENST00000533209 ATRXP46100 2492 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 IGKV3D-11A0A0A0MRZ8 115 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 IGHV1-45A0A0A0MS14 117 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 WDR91A4D1P6 747 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 TGFBR3LH3BV60 316 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 PRMT3O60678 531 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 SASH3O75995 380 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 GBAP04062 536 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 MAOAP21397 527 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 SERPINB3P29508 390 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 SLC18A1P54219 525 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 RRADP55042 308 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 HNRNPH2P55795 449 aaKnown RBP11.27□□□□□ -0.61
SSBP3-214ENST00000533209 WDR4P57081 412 aaKnown RBP11.27□□□□□ -0.61
SSBP3-214ENST00000533209 GALNT1Q10472 559 aaPredicted RBP11.27□□□□□ -0.61
SSBP3-214ENST00000533209 TBL3Q12788 808 aaKnown RBP11.27□□□□□ -0.61
SSBP3-214ENST00000533209 PCOLCEQ15113 449 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 TTMPQ5BVD1 217 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 CLEC6AQ6EIG7 209 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 SCIMPQ6UWF3 145 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 CPEB2Q7Z5Q1 589 aaKnown RBP11.27□□□□□ -0.61
SSBP3-214ENST00000533209 NUDT13Q86X67 352 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 SCUBE1Q8IWY4 988 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 GBP7Q8N8V2 638 aaPredicted RBP11.27□□□□□ -0.61
SSBP3-214ENST00000533209 FAM47BQ8NA70 645 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 SREK1Q8WXA9 508 aaKnown RBP11.27□□□□□ -0.61
SSBP3-214ENST00000533209 METTL21AQ8WXB1 218 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 FER1L6-AS2Q96M78 137 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 PTCHD1Q96NR3 888 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 ARHGAP9Q9BRR9 750 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 ACPTQ9BZG2 426 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 ZNF700Q9H0M5 742 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 MLXIPLQ9NP71 852 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 NECTIN3Q9NQS3 549 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 PRDM9Q9NQV7 894 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 VPS29Q9UBQ0 182 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 ADAM29Q9UKF5 820 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 RALYQ9UKM9 306 aaKnown RBP11.27□□□□□ -0.61
SSBP3-214ENST00000533209 FBXW2Q9UKT8 454 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 ASB4Q9Y574 426 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 CLDN16Q9Y5I7 305 aa11.27□□□□□ -0.61
SSBP3-214ENST00000533209 IGHV3-20A0A0C4DH32 117 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 AZIN1O14977 448 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 ATXN7O15265 892 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-214ENST00000533209 CRCPO75575 148 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 CEACAM4O75871 244 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 HPP00738 406 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 SERPINE1P05121 402 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 KLK1P06870 262 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 FGF4P08620 206 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 FAM58BPP0C7Q3 252 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 UROSP10746 265 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 CPN2P22792 545 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 TPP2P29144 1249 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-214ENST00000533209 SERPINB5P36952 375 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 CCL11P51671 97 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 HSD17B7P56937 341 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 HMGCS1Q01581 520 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 Q0VFX4 171 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 KCNAB2Q13303 367 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 NSDHLQ15738 373 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 CHI3L2Q15782 390 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 HHATQ5VTY9 493 aa11.26□□□□□ -0.61
SSBP3-214ENST00000533209 KANK2Q63ZY3 851 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms