RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 VKORC1Q9BQB6 163 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 TRMOQ9BU70 441 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 C1QTNF3Q9BXJ4 246 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 SHCBP1LQ9BZQ2 653 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 CD244Q9BZW8 370 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 MVB12BQ9H7P6 319 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 PNPOQ9NVS9 261 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 WWOXQ9NZC7 414 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 CIDEBQ9UHD4 219 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 ASF1AQ9Y294 204 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 ASB1Q9Y576 335 aa10.68□□□□□ -0.7
TRAPPC4-213ENST00000533149 NSG1A0A0A6YYJ2 146 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 KRT87PA6NCN2 255 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 OR5H15A6NDH6 313 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 VSTM2BA6NLU5 285 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 PPP6CO00743 305 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 NDUFAB1O14561 156 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 CCNT2O60583 730 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 WFS1O76024 890 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 TGDSO95455 350 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 F10P00742 488 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 SERPINA7P05543 415 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 RPS17P08708 135 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 KITP10721 976 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 ABOP16442 354 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 GGT5P36269 586 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 GDF5P43026 501 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 HNMTP50135 292 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 RAB28P51157 221 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 NAA20P61599 178 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 AP2B1P63010 937 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 CLCQ05315 142 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 PRKG2Q13237 762 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 CEBPEQ15744 281 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 YOD1Q5VVQ6 348 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 RIPOR1Q6ZS17 1223 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 DMRTC2Q8IXT2 367 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 DNAJC22Q8N4W6 341 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 SIRT6Q8N6T7 355 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 TEX9Q8N6V9 391 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 OR5AR1Q8NGP9 310 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 OR9A1PQ8NGU1 263 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 MAGEC3Q8TD91 643 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 AGAP11Q8TF27 550 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 UBTD2Q8WUN7 234 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 ATL1Q8WXF7 558 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 NRGNQ92686 78 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 RAD51AP1Q96B01 352 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 TMEM79Q9BSE2 394 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 HGH1Q9BTY7 390 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 CRB3Q9BUF7 120 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 ATG10Q9H0Y0 220 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 EML4Q9HC35 981 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 ZDHHC2Q9UIJ5 367 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 PCTPQ9UKL6 214 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 TDRKHQ9Y2W6 561 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 RAP2CQ9Y3L5 183 aa10.67□□□□□ -0.7
TRAPPC4-213ENST00000533149 A0A0J9YY10 115 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 FAM227AF5H4B4 570 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 MYO1CO00159 1063 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 UBFD1O14562 309 aaKnown RBP10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 DSCR3O14972 297 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 SNX3O60493 162 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 STK16O75716 305 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 SNUPNO95149 360 aaKnown RBP10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 RPN2P04844 631 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 CTSBP07858 339 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 TROVE2P10155 538 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 UGT2B7P16662 529 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 SHMT2P34897 504 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 GCGRP47871 477 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 RPL14P50914 215 aaKnown RBP10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 PMP22Q01453 160 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 GALNT1Q10472 559 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 NAE1Q13564 534 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 GTF2H2Q13888 395 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 ABHD17BQ5VST6 288 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 ATG9BQ674R7 924 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 GTF2H2CQ6P1K8 395 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 METTL2BQ6P1Q9 378 aaKnown RBP10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 AGTRAPQ6RW13 159 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 NCCRP1Q6ZVX7 275 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 COX15Q7KZN9 410 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 SPATA21Q7Z572 469 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 GOLGA7Q7Z5G4 137 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 TRIM73Q86UV7 250 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 DCUN1D3Q8IWE4 304 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 TBC1D21Q8IYX1 336 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 ZNF781Q8N8C0 355 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 RFWD2Q8NHY2 731 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 ALPK1Q96QP1 1244 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 OR2A14Q96R47 310 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 DMRTA2Q96SC8 542 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 XKR8Q9H6D3 395 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 ZBTB26Q9HCK0 441 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 NPHS2Q9NP85 383 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 SEMA4BQ9NPR2 832 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 STOX2Q9P2F5 926 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 OPTCQ9UBM4 332 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms