RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 C15orf38-AP3S2A0A0A6YYH1 394 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 H0YGG7 62 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 C8BP07358 591 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 NCK1P16333 377 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 CALRP27797 417 aaKnown RBP17.56■□□□□ 0.4
SMPD1-208ENST00000533123 KIR3DL1P43629 444 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 EEFSECP57772 596 aaKnown RBP17.56■□□□□ 0.4
SMPD1-208ENST00000533123 ARF3P61204 181 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-208ENST00000533123 HYAL2Q12891 473 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 KCNAB1Q14722 419 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 DEPDC1Q5TB30 811 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 STPG1Q5TH74 334 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 KHDRBS2Q5VWX1 349 aaKnown RBP17.56■□□□□ 0.4
SMPD1-208ENST00000533123 ASCL5Q7RTU5 278 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 DGLUCYQ7Z3D6 616 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 ARPINQ7Z6K5 226 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 ASPGQ86U10 573 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 SPPL2CQ8IUH8 684 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 AICDAQ9GZX7 198 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 KLHL31Q9H511 634 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 PDE7BQ9NP56 450 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 LRIT2A6NDA9 550 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 AGRPO00253 132 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 ARPC2O15144 300 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 P2RX6O15547 441 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 KLHL18O94889 574 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 CTSBP07858 339 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 EFNA1P20827 205 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-208ENST00000533123 GSTM2P28161 218 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 MLLT3P42568 568 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-208ENST00000533123 CCDC157Q569K6 752 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 GALNT18Q6P9A2 607 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 GPR180Q86V85 440 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 KBTBD2Q8IY47 623 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 DNAJC22Q8N4W6 341 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 KCT2Q8NC54 265 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 RCBTB1Q8NDN9 531 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 RERGQ96A58 199 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-208ENST00000533123 AURKBQ96GD4 344 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-208ENST00000533123 LRGUKQ96M69 825 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 GFM1Q96RP9 751 aaKnown RBP17.56■□□□□ 0.4
SMPD1-208ENST00000533123 PCDHB14Q9Y5E9 798 aa17.56■□□□□ 0.4
SMPD1-208ENST00000533123 TRBV5-3A0A0A0MS03 114 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 SCAMP2O15127 329 aaKnown RBP17.55■□□□□ 0.4
SMPD1-208ENST00000533123 NVLO15381 856 aaKnown RBP17.55■□□□□ 0.4
SMPD1-208ENST00000533123 KLK1P06870 262 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 GP1BAP07359 652 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 LAMP1P11279 417 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 ARL4DP49703 201 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 WNT3P56703 355 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 OR4D2P58180 307 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 VSX2P58304 361 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-208ENST00000533123 RHDQ02161 417 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 KLC1Q07866 573 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 BNIP2Q12982 314 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 LRRC36Q1X8D7 754 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 LPCAT4Q643R3 524 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 ZFP1Q6P2D0 407 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 MCATQ8IVS2 390 aaKnown RBP17.55■□□□□ 0.4
SMPD1-208ENST00000533123 METTL4Q8N3J2 472 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 OR4D9Q8NGE8 314 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 OR8J3Q8NGG0 315 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 FAM110BQ8TC76 370 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 TM4SF19Q96DZ7 209 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 STARD5Q9NSY2 213 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 EXO1Q9UQ84 846 aaKnown RBP17.55■□□□□ 0.4
SMPD1-208ENST00000533123 MAN2B2Q9Y2E5 1009 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 IGHV5-10-1A0A0J9YXX1 117 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-208ENST00000533123 TCRBV3S1A0A5B6 114 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 RTCAO00442 366 aaKnown RBP17.55■□□□□ 0.4
SMPD1-208ENST00000533123 PRMT3O60678 531 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 FESP07332 822 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 PIM1P11309 404 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-208ENST00000533123 PTPN6P29350 595 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 PLA2G16P53816 162 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 HSD11B2P80365 405 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 MUM1Q2TAK8 710 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 ZC3H12BQ5HYM0 836 aaKnown RBP17.55■□□□□ 0.4
SMPD1-208ENST00000533123 PRSS42Q7Z5A4 293 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 CARFQ8N187 725 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 SLCO4A1Q96BD0 722 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 THAP11Q96EK4 314 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 ITCHQ96J02 903 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 RMND5AQ9H871 391 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 COPS7BQ9H9Q2 264 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-208ENST00000533123 SEMA5BQ9P283 1151 aa17.55■□□□□ 0.4
SMPD1-208ENST00000533123 A0A0G2JN53 185 aa17.54■□□□□ 0.4
SMPD1-208ENST00000533123 GABRR3A8MPY1 467 aa17.54■□□□□ 0.4
SMPD1-208ENST00000533123 NTN3O00634 580 aaPredicted RBP17.54■□□□□ 0.4
SMPD1-208ENST00000533123 PLPP1O14494 284 aa17.54■□□□□ 0.4
SMPD1-208ENST00000533123 FOXD2O60548 495 aaPredicted RBP17.54■□□□□ 0.4
SMPD1-208ENST00000533123 SLC35G6P0C7Q6 338 aa17.54■□□□□ 0.4
SMPD1-208ENST00000533123 PEX2P28328 305 aa17.54■□□□□ 0.4
SMPD1-208ENST00000533123 ASMTP46597 345 aa17.54■□□□□ 0.4
SMPD1-208ENST00000533123 C21orf58P58505 322 aa17.54■□□□□ 0.4
SMPD1-208ENST00000533123 ZNF763Q0D2J5 394 aa17.54■□□□□ 0.4
SMPD1-208ENST00000533123 SPATS1Q496A3 300 aa17.54■□□□□ 0.4
SMPD1-208ENST00000533123 LILRA2Q8N149 483 aa17.54■□□□□ 0.4
SMPD1-208ENST00000533123 PQLC1Q8N2U9 271 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms